Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0191.Seq
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112114-1|AAI12115.1|  321|Homo sapiens gap junction protein, a...    31   3.5  
BC112110-1|AAI12111.1|  321|Homo sapiens gap junction protein, a...    31   3.5  
BC069339-1|AAH69339.1|  321|Homo sapiens gap junction protein, a...    31   3.5  
AF153047-1|AAD54234.1|  321|Homo sapiens gap junction protein co...    31   3.5  
AB037509-1|BAA90429.1|  237|Homo sapiens gap junction protein co...    31   3.5  

>BC112114-1|AAI12115.1|  321|Homo sapiens gap junction protein,
           alpha 9, 36kDa protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 373 QVMLRNILKLNFLKSQYFFK*KRLPGLY 290
           QV+ RN L++ FL  QYF     +PGLY
Sbjct: 202 QVVFRNALEIGFLVGQYFLYGFSVPGLY 229


>BC112110-1|AAI12111.1|  321|Homo sapiens gap junction protein,
           alpha 9, 36kDa protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 373 QVMLRNILKLNFLKSQYFFK*KRLPGLY 290
           QV+ RN L++ FL  QYF     +PGLY
Sbjct: 202 QVVFRNALEIGFLVGQYFLYGFSVPGLY 229


>BC069339-1|AAH69339.1|  321|Homo sapiens gap junction protein,
           alpha 9, 36kDa protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 373 QVMLRNILKLNFLKSQYFFK*KRLPGLY 290
           QV+ RN L++ FL  QYF     +PGLY
Sbjct: 202 QVVFRNALEIGFLVGQYFLYGFSVPGLY 229


>AF153047-1|AAD54234.1|  321|Homo sapiens gap junction protein
           connexin-36 protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 373 QVMLRNILKLNFLKSQYFFK*KRLPGLY 290
           QV+ RN L++ FL  QYF     +PGLY
Sbjct: 202 QVVFRNALEIGFLVGQYFLYGFSVPGLY 229


>AB037509-1|BAA90429.1|  237|Homo sapiens gap junction protein
           connexin-36 protein.
          Length = 237

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 373 QVMLRNILKLNFLKSQYFFK*KRLPGLY 290
           QV+ RN L++ FL  QYF     +PGLY
Sbjct: 144 QVVFRNALEIGFLVGQYFLYGFSVPGLY 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,271,482
Number of Sequences: 237096
Number of extensions: 1682472
Number of successful extensions: 1752
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1752
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)