Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0190.Seq
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 175 2e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 161 6e-40
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 4e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 4e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 5e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 5e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 5e-11
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 54 1e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.15
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.25
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.25
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.0
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.4
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 27 9.6
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 27 9.6
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 27 9.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 42 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVL+VA GTGEFEA
Sbjct: 102 MITGTSQADCAVLVVACGTGEFEA 125
Score = 57.6 bits (133), Expect = 8e-09
Identities = 50/140 (35%), Positives = 64/140 (45%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
KNGQTREHALLA TLGVKQL V+ T P S R + I++ + + +P +
Sbjct: 129 KNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHLSQSPDST 180
Query: 442 AFVPISGWHGDNMLEPSTKMPWSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVF 621
L SRDG + +K L E S +L PS H A LT VF
Sbjct: 181 E---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVF 231
Query: 622 PCKTYTKSVVLVPCPSAELK 681
+ T+S L P S L+
Sbjct: 232 HSRMCTRSEELEPSQSDVLR 251
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 42 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVL+VA GTGEFEA
Sbjct: 102 MITGTSQADCAVLVVACGTGEFEA 125
Score = 140 bits (340), Expect = 6e-34
Identities = 74/123 (60%), Positives = 87/123 (70%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
KNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 442 AFVPISGWHGDNMLEPSTKMPWSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVF 621
FVPISG++GDNMLE S+ MPW + W+V++ + NAS K + + P P
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTDR 244
Query: 622 PCK 630
P +
Sbjct: 245 PLR 247
Score = 113 bits (273), Expect = 9e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +3
Query: 510 KGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
KGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGI 271
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 42 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVL+VA GTGEFEA
Sbjct: 102 MITGTSQADCAVLVVACGTGEFEA 125
Score = 140 bits (340), Expect = 6e-34
Identities = 74/123 (60%), Positives = 87/123 (70%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
KNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 442 AFVPISGWHGDNMLEPSTKMPWSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVF 621
FVPISG++GDNMLE S+ MPW + W+V++ + NAS K + + P P
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTDR 244
Query: 622 PCK 630
P +
Sbjct: 245 PLR 247
Score = 113 bits (273), Expect = 9e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +3
Query: 510 KGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
KGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGI 271
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 161 bits (390), Expect = 6e-40
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 42 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVA 229
MITGTSQADCAVL+VA
Sbjct: 102 MITGTSQADCAVLVVA 117
Score = 113 bits (273), Expect = 9e-26
Identities = 50/60 (83%), Positives = 55/60 (91%)
Frame = +3
Query: 510 KGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
KGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 178 KGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGI 237
Score = 105 bits (252), Expect = 3e-23
Identities = 55/104 (52%), Positives = 69/104 (66%)
Frame = +1
Query: 319 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 498
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 499 MPWSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCK 630
MPW + W+V++ + NAS K + + P P P +
Sbjct: 174 MPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTDRPLR 213
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (275), Expect = 5e-26
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
F+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI N
Sbjct: 205 FKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISN 264
Query: 182 MITGTSQADCAVLIVAAGTGEFE 250
MITGTSQAD A+L+V A TGEFE
Sbjct: 265 MITGTSQADAAILVVNATTGEFE 287
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/74 (45%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +1
Query: 268 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVA 444
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 294 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--K 349
Query: 445 FVPISGWHGDNMLE 486
FVP+SG+ G+N+++
Sbjct: 350 FVPVSGFTGENLIK 363
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 546 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 686
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (275), Expect = 5e-26
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
F+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI N
Sbjct: 223 FKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISN 282
Query: 182 MITGTSQADCAVLIVAAGTGEFE 250
MITGTSQAD A+L+V A TGEFE
Sbjct: 283 MITGTSQADAAILVVNATTGEFE 305
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/74 (45%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +1
Query: 268 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVA 444
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 312 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--K 367
Query: 445 FVPISGWHGDNMLE 486
FVP+SG+ G+N+++
Sbjct: 368 FVPVSGFTGENLIK 381
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 546 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 686
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
+E+EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ N
Sbjct: 144 YEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPN 203
Query: 182 MITGTSQADCAVLIVAAGTGEFE 250
MI G +QAD AVL+++A GEFE
Sbjct: 204 MIVGANQADLAVLVISARRGEFE 226
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA- 438
+ GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP
Sbjct: 231 RGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTD 290
Query: 439 VAFVPISGWHGDNMLEPSTKMPWSRDGRW 525
+ +VP SG G + + P +G W
Sbjct: 291 ITYVPCSGLTGAFIKD----RPTGSEGNW 315
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 549 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 686
G C IE +D +LP R + P+R + + Y +GTV +G++E+G
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKMESG 362
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 236 TGEFE 250
G E
Sbjct: 143 DGVME 147
Score = 34.3 bits (75), Expect = 0.083
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +3
Query: 489 FNQNA--LVKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGI 653
FN +A +++G + EG+ D C LI+ALD++ P R +P+ I G
Sbjct: 195 FNGDATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGR 253
Query: 654 GTVPVGRVETGV 689
GTV VG +E GV
Sbjct: 254 GTVIVGTLERGV 265
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 271 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 450
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 236 TGEFE 250
G E
Sbjct: 143 DGVME 147
Score = 34.3 bits (75), Expect = 0.083
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +3
Query: 489 FNQNA--LVKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGI 653
FN +A +++G + EG+ D C LI+ALD++ P R +P+ I G
Sbjct: 195 FNGDATPVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGR 253
Query: 654 GTVPVGRVETGV 689
GTV VG +E GV
Sbjct: 254 GTVIVGTLERGV 265
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 271 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 450
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 236 TG 241
G
Sbjct: 147 DG 148
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 271 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 426
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 236 TG 241
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 271 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 426
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 236 TG 241
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 271 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 426
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAER 79
FEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 42 FEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 53 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 233 GTG 241
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 53 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 233 GTG 241
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 236 TG 241
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 26 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 202
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 203 ADCAVLIVAA--GTGEFEAVSLRTVK 274
AD VL+VAA G E A S++ K
Sbjct: 228 ADIVVLVVAADDGVKEQTAQSIKFAK 253
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 226
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 226
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 59 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 223
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 224 VAAGTG 241
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 59 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 223
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 224 VAAGTG 241
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 134 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 229
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 92 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 241
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 92 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 241
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 143 IIDAPGHRDFIKNMITGTSQADCAVLIV 226
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 401 PHTSRRLATTQLLSLSCPFLD 463
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 401 PHTSRRLATTQLLSLSCPFLD 463
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 401 PHTSRRLATTQLLSLSCPFLD 463
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 401 PHTSRRLATTQLLSLSCPFLD 463
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVA 444
QT EH LLA ++I+ +NK D E + + E K+V +K +G N V
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVE 167
Query: 445 FVPISGWHGDNMLE 486
G+ + ML+
Sbjct: 168 MSLADGYFKEEMLQ 181
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 137 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 241
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 137 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAAGTGEFEAVS 259
V IID+ G RDFI KN+ GT+ A V + EA+S
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDASSLEEALS 115
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 343 DSTEPPYSEP-RFEEIKKEVSSYIKKIGYNPAAVAFV--PISGWHGDNMLEPSTKMPWSR 513
D TE + P +++E++KE+ + + + AA A P+ + L + K+ R
Sbjct: 78 DCTEGAEATPEQWKELEKELDKVVAFMKDSEAAKATETDPVKRYKNLCQLSMTLKIMSPR 137
Query: 514 DGRWSVKKAKLTENASLKL 570
DG W + K TE L +
Sbjct: 138 DGGWKILHDKRTEAEQLAI 156
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 367 EPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS----GWHGDNMLEPSTKMPWSRDGR 522
+P E+ K+VS +KK G P PIS G L + +P SR GR
Sbjct: 237 KPSTSEVPKDVSKELKKRGRKPKMDPTAPISTTSTGGGDKGKLSGTIPVPKSRRGR 292
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 266 FLEIQLRIHRYRQLR*AQRNQPERFL 189
++ I + I +Y LR AQR+QP +++
Sbjct: 181 YIPIVISIRKYANLRWAQRSQPHKYI 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,249,996
Number of Sequences: 27780
Number of extensions: 375664
Number of successful extensions: 1238
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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