Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0190.Seq
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 5e-39
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 106 2e-23
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 83 2e-16
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 5e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 5e-11
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 44 7e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 43 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 9e-04
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.005
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.019
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.019
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.025
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.025
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.033
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.31
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.31
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.41
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.41
At5g34780.1 68418.m04048 dehydrogenase E1 component family prote... 31 0.72
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.95
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 0.95
At5g39080.1 68418.m04728 transferase family protein similar to a... 30 1.7
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 30 1.7
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.2
At2g31060.1 68415.m03790 elongation factor family protein contai... 29 2.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.9
At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putativ... 29 3.8
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.1
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.7
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 6.7
At1g01060.2 68414.m00007 myb family transcription factor contain... 28 6.7
At1g01060.1 68414.m00006 myb family transcription factor contain... 28 6.7
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 8.9
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 8.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 42 FEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVLI+ + TG FEA
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEA 125
Score = 125 bits (302), Expect = 2e-29
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
K+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKI 188
Query: 442 AFVPISGWHGDNMLEPSTKMPW 507
FVPISG+ GDNM+E ST + W
Sbjct: 189 PFVPISGFEGDNMIERSTNLDW 210
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3
Query: 549 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 42 FEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVLI+ + TG FEA
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEA 125
Score = 125 bits (302), Expect = 2e-29
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
K+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKI 188
Query: 442 AFVPISGWHGDNMLEPSTKMPW 507
FVPISG+ GDNM+E ST + W
Sbjct: 189 PFVPISGFEGDNMIERSTNLDW 210
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3
Query: 549 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 42 FEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVLI+ + TG FEA
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEA 125
Score = 125 bits (302), Expect = 2e-29
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
K+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKI 188
Query: 442 AFVPISGWHGDNMLEPSTKMPW 507
FVPISG+ GDNM+E ST + W
Sbjct: 189 PFVPISGFEGDNMIERSTNLDW 210
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3
Query: 549 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 42 FEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MITGTSQADCAVLI+ + TG FEA
Sbjct: 102 MITGTSQADCAVLIIDSTTGGFEA 125
Score = 125 bits (302), Expect = 2e-29
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV 441
K+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 129 KDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKI 188
Query: 442 AFVPISGWHGDNMLEPSTKMPW 507
FVPISG+ GDNM+E ST + W
Sbjct: 189 PFVPISGFEGDNMIERSTNLDW 210
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +3
Query: 549 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG+
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGM 259
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 106 bits (254), Expect = 2e-23
Identities = 44/84 (52%), Positives = 63/84 (75%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
+EKEA+ GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ N
Sbjct: 274 YEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPN 333
Query: 182 MITGTSQADCAVLIVAAGTGEFEA 253
MI G +QAD A+L++ A G FEA
Sbjct: 334 MIAGATQADAAILVIDASVGAFEA 357
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/72 (37%), Positives = 46/72 (63%)
Frame = +1
Query: 268 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 447
GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ +
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFKDSSLTW 421
Query: 448 VPISGWHGDNML 483
+P+S N++
Sbjct: 422 IPLSAMENQNLV 433
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 492 NQNALVKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV- 668
NQN LV R G CL++A+D++ P R KPL +P+ D + G V
Sbjct: 429 NQN-LVAAPSDNRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSAC 487
Query: 669 GRVETG 686
G++E G
Sbjct: 488 GKLEAG 493
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/83 (43%), Positives = 57/83 (68%)
Frame = +2
Query: 2 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 181
+EKEA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ N
Sbjct: 136 YEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPN 195
Query: 182 MITGTSQADCAVLIVAAGTGEFE 250
MI+G SQAD VL+++A GEFE
Sbjct: 196 MISGASQADIGVLVISARKGEFE 218
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 262 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA- 438
+ GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN
Sbjct: 223 RGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKD 282
Query: 439 VAFVPISGWHGDNM 480
V F+PISG G NM
Sbjct: 283 VVFLPISGLMGKNM 296
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 549 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 686
G E LD+I P R + P R+P+ D +K +GTV +G+VE+G
Sbjct: 310 GPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESG 353
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 236 TG 241
G
Sbjct: 177 DG 178
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 504 LVKGWQVERKEGKADGKC--LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGR 674
L + +V+R + K K L++A+D +P P R T+ P L ++DV+ I G GTV GR
Sbjct: 249 LTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGR 308
Query: 675 VETG 686
VE G
Sbjct: 309 VERG 312
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 408
QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 236 TG 241
G
Sbjct: 165 DG 166
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 558 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV 689
L++A+D +P P R DKP +P++DV+ I G GTV GR+E GV
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGV 293
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 271 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 450
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G + +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGS 229
Query: 451 PISGWHGDN 477
+S G N
Sbjct: 230 ALSALQGTN 238
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 56 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 223
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 224 VAAGTGEFEAVSLRTV 271
V A G EA +L V
Sbjct: 183 VDASQG-VEAQTLANV 197
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 236 TG 241
G
Sbjct: 168 GG 169
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 236 TG 241
G
Sbjct: 168 GG 169
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 236 TG 241
G
Sbjct: 109 EG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 235
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 236 TG 241
G
Sbjct: 196 AG 197
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 53 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 233 GTG 241
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 53 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 233 GTG 241
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 74 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 238
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 239 G 241
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 74 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 238
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 239 G 241
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.033
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +2
Query: 56 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 208
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 209 CAVLIVAAGTG 241
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 137 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 241
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 122 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 122 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 134 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 116 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 232
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g34780.1 68418.m04048 dehydrogenase E1 component family protein
similar to SP|P50136 2-oxoisovalerate dehydrogenase
alpha subunit, mitochondrial precursor (EC 1.2.4.4)
(Branched-chain alpha-keto acid dehydrogenase component
alpha chain) {Mus musculus}; contains Pfam profile
PF00676: Dehydrogenase E1 component
Length = 365
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 456 FWMARRQHVGAFNQNALVKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 635
+W R V F ++ GW E E K + L AI + +PL DV
Sbjct: 151 YWKMSRNSVNRFRKSVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 210
Query: 636 YKI 644
Y +
Sbjct: 211 YDV 213
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 301 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 462
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 531 KEGKADGKCLIEALDAILPPARPTDKP 611
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At5g39080.1 68418.m04728 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 463
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -1
Query: 614 QGLVSGAGRWQDGIESFNEAFSVSFAFFTLH--LPSLDQGILVEGSN 480
+GL++ A D IE ++E+F+ F + LP Q ILV GSN
Sbjct: 353 EGLLAAATMVSDSIEEWDESFAWKIPDFVAYATLPPETQLILVSGSN 399
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = -1
Query: 650 TTDFVYVLQGKTQGLVSGAGRWQDGIESFNEAFSVSFAFFTLHLPSLDQGILVEGSNM 477
TT ++ VLQ T GL A +D +E E VSF L S Q L E +NM
Sbjct: 1631 TTIYLDVLQKTTSGLADDASNSEDRLEGAAEEKLVSFCEQVLKETSDLQSTLGETTNM 1688
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 143 IIDAPGHRDFIKNMITGTSQADCAVLIV 226
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 143 IIDAPGHRDFIKNMITGTSQADCAVLIV 226
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 143 IIDAPGHRDFIKNMITGTSQADCAVLIV 226
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 125 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 226
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 137 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 226
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +3
Query: 510 KGW--QVERKEGKADGKCLIEALDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVG 671
+GW K+ D K + + LDA++ PP D+P + + + K +G + G
Sbjct: 82 EGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTG 141
Query: 672 RVETGV 689
RV +GV
Sbjct: 142 RVTSGV 147
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 62 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 229
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 230 AGTG 241
A G
Sbjct: 585 ADDG 588
>At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +3
Query: 456 FWMARRQHVGAFNQNALVKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 635
+W R V F + GW E E K + L AI + +PL DV
Sbjct: 381 YWKMSRNPVNRFRKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 440
Query: 636 YKI 644
Y +
Sbjct: 441 YDV 443
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 364 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 453
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 370 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 480
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 661 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 557
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 441 RFRAHFWMARRQHVGAFN----QNALVKGWQVERKEGKADGKCLIEALDAILPPARPTDK 608
R W +H+G ++ K + KE + G + +ALD +PP RP K
Sbjct: 40 RLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRK 99
Query: 609 P 611
P
Sbjct: 100 P 100
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 441 RFRAHFWMARRQHVGAFN----QNALVKGWQVERKEGKADGKCLIEALDAILPPARPTDK 608
R W +H+G ++ K + KE + G + +ALD +PP RP K
Sbjct: 40 RLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIEIPPPRPKRK 99
Query: 609 P 611
P
Sbjct: 100 P 100
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 346 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 459
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 346 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 459
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,536,701
Number of Sequences: 28952
Number of extensions: 360594
Number of successful extensions: 1262
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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