Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0187.Seq
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.4  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        24   4.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   4.2  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   9.8  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   9.8  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   9.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 466 RGQTLELVRLGLVFLHEGMLGVAVEQLGHVSGRHLRWFPEMRRGERKAEQQVGVL 302
           RGQ     R+G   +H      ++  LG     HL W P +     KA + VGV+
Sbjct: 717 RGQLKVPFRVGDTIIHSKQ---SIRYLGVQIHDHLSWKPHVELSTAKALRVVGVV 768


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 287 LRLSVAVQPLPHTSGSCSPSTERGRTKSQ*TEAFR 183
           L L++ + P   T+G CSP  E+   K+   E  R
Sbjct: 14  LLLTLLIVPHHGTNGQCSPGDEKKAEKATDLEQSR 48


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = -1

Query: 476 VGTARPDVGTRPSWPCIPSRRDAGGGCRATGPCIGPTP 363
           VG    + GT    P +P  R         GPC G  P
Sbjct: 389 VGFCGKEYGTDFDIPALPPSRFDVAASGGVGPCFGEPP 426


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 263 PLPHTSGSCSPSTERGRT 210
           P+PHT+    P  E GR+
Sbjct: 723 PIPHTTRPPRPDEENGRS 740


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 160 HTTA*WSYLNASVHWDLVRPLSVLGLQLPEVW 255
           HT    S++  S+H  L   LS+L      +W
Sbjct: 29  HTLTIHSHMTVSLHCSLSLSLSLLSPSFSPIW 60


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 374 RYMAQLLDSHPQHPFVKEYKAKTD 445
           RY   L+D H ++ FV   K K++
Sbjct: 359 RYYMTLIDDHSRYTFVYFLKKKSE 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,584
Number of Sequences: 2352
Number of extensions: 11459
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)