Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0187.Seq
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 70 5e-12
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 70 5e-12
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 70 5e-12
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 70 5e-12
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 70 5e-12
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 70 5e-12
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 70 5e-12
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 70 5e-12
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 70 5e-12
BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2 pro... 31 4.0
BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2 pro... 31 4.0
AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM) do... 31 4.0
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 30 5.3
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 30 5.3
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 30 5.3
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 30 5.3
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 30 5.3
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 30 5.3
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 30 5.3
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 30 5.3
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 30 5.3
AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, al... 30 5.3
AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein. 30 7.0
AB089939-1|BAD06471.1| 1039|Homo sapiens N-acetylgalactosaminylt... 30 7.0
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 29 9.3
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 29 9.3
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 29 9.3
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 29 9.3
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 29 9.3
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 203
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 265 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 149 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 202
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 264 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 306
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +3
Query: 6 AFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHY 167
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y
Sbjct: 87 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYY 140
Score = 64.9 bits (151), Expect = 2e-10
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2
Query: 353 KPPEVSARYMAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 481
KPPEV+ RY++QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 202 KPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 244
>BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -1
Query: 461 PDVGTRPSW-----PCIPSRRDAGGGCRATGPCIGPTP 363
P V P+W PC P G G + GPC+ P+P
Sbjct: 312 PSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSP 349
>BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -1
Query: 461 PDVGTRPSW-----PCIPSRRDAGGGCRATGPCIGPTP 363
P V P+W PC P G G + GPC+ P+P
Sbjct: 312 PSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSP 349
>AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM)
domain protein.
Length = 333
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = -1
Query: 461 PDVGTRPSW-----PCIPSRRDAGGGCRATGPCIGPTP 363
P V P+W PC P G G + GPC+ P+P
Sbjct: 278 PSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPCLRPSP 315
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 309 PTCCSALRSPRRISGNHRR-CRP-DTWP 386
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 419 RRDAGGGCRATG-PCIGPTPPVVSRD 345
RR G R T PC GP PP SRD
Sbjct: 117 RRPGGPALRPTPRPCAGPAPPPASRD 142
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 1033 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 1077
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 309 PTCCSALRSPRRISGNHRR-CRP-DTWP 386
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 419 RRDAGGGCRATG-PCIGPTPPVVSRD 345
RR G R T PC GP PP SRD
Sbjct: 117 RRPGGPALRPTPRPCAGPAPPPASRD 142
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 309 PTCCSALRSPRRISGNHRR-CRP-DTWP 386
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 419 RRDAGGGCRATG-PCIGPTPPVVSRD 345
RR G R T PC GP PP SRD
Sbjct: 117 RRPGGPALRPTPRPCAGPAPPPASRD 142
>AB209686-1|BAD92923.1| 867|Homo sapiens collagen, type XXIV, alpha
1 variant protein.
Length = 867
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 355 TTGGVGPIHGPVARQPPPASLREGIQGQDG-RVPTSGRAVPTLSG 486
T G VG P R P A EG+QG+DG + GR +P G
Sbjct: 207 TAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDG 251
>AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein.
Length = 177
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 291 PAPHSTPTCCSALRSPRRISGNHR-RCRP 374
P P P CC AL PR + +HR C P
Sbjct: 127 PLPKELPPCCRALVWPRATTASHRHHCLP 155
>AB089939-1|BAD06471.1| 1039|Homo sapiens
N-acetylgalactosaminyltransferase protein.
Length = 1039
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 382 GPVARQP-PPASLREGIQGQDGRVPTSGRAVPTLSG*LNA 498
GP A QP PPA + G++G+ T G A PT+ L++
Sbjct: 581 GPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSS 620
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -1
Query: 485 PLRVGTARPDVGTR----PSWPCIPSRRDAGGGCRATGPCIGPTPPV 357
PL +G PD T PSWPC P +G PC+ P P V
Sbjct: 903 PLSMGPVLPDPFTHYAPLPSWPCYPHVSPSG------YPCLPPPPTV 943
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -1
Query: 485 PLRVGTARPDVGTR----PSWPCIPSRRDAGGGCRATGPCIGPTPPV 357
PL +G PD T PSWPC P +G PC+ P P V
Sbjct: 783 PLSMGPVLPDPFTHYAPLPSWPCYPHVSPSG------YPCLPPPPTV 823
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -1
Query: 485 PLRVGTARPDVGTR----PSWPCIPSRRDAGGGCRATGPCIGPTPPV 357
PL +G PD T PSWPC P +G PC+ P P V
Sbjct: 903 PLSMGPVLPDPFTHYAPLPSWPCYPHVSPSG------YPCLPPPPTV 943
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -1
Query: 485 PLRVGTARPDVGTR----PSWPCIPSRRDAGGGCRATGPCIGPTPPV 357
PL +G PD T PSWPC P +G PC+ P P V
Sbjct: 903 PLSMGPVLPDPFTHYAPLPSWPCYPHVSPSG------YPCLPPPPTV 943
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = -1
Query: 485 PLRVGTARPDVGTR----PSWPCIPSRRDAGGGCRATGPCIGPTPPV 357
PL +G PD T PSWPC P +G PC+ P P V
Sbjct: 905 PLSMGPVLPDPFTHYAPLPSWPCYPHVSPSG------YPCLPPPPTV 945
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,212,042
Number of Sequences: 237096
Number of extensions: 1700139
Number of successful extensions: 5717
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5717
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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