Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0186.Seq
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 167  SSTTISRWSSQCNRQDLSTTRP 102
            SSTT S W +    +  +TTRP
Sbjct: 1044 SSTTTSPWWTTTTTRRTTTTRP 1065


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -2

Query: 623 TNDDDNIILVWLKVFFLSQRKV*VLLINLNFRFLERKPANFRLVISKFHFYPLLIYYIWI 444
           T ++ N    WL V  L+     + ++ + F F  +K   F +   K+HF+  L   +W 
Sbjct: 47  TYNNTNRKYYWLNVCCLN-----LSIVTIFFNFATKKLEQFIVRFMKYHFFGTL--KLWS 99

Query: 443 SCF 435
             F
Sbjct: 100 QLF 102


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 124 CRLHWLDHREIVVDDHPVQKVILFLFCS 207
           C  +WLD       D  +QK +    C+
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACT 322


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 124 CRLHWLDHREIVVDDHPVQKVILFLFCS 207
           C  +WLD       D  +QK +    C+
Sbjct: 295 CIWYWLDRESAKNVDQRIQKALFLFACT 322


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 335 GLKMTLASNTRNRLCSPLV 279
           G   TLAS + N+L +P+V
Sbjct: 268 GRSFTLASASNNKLGAPIV 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,862
Number of Sequences: 336
Number of extensions: 3108
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)