Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0186.Seq
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052110-1|AAK93534.1|  464|Drosophila melanogaster SD05591p pro...    31   2.4  
AE013599-2646|AAF57729.1|  464|Drosophila melanogaster CG5721-PA...    31   2.4  

>AY052110-1|AAK93534.1|  464|Drosophila melanogaster SD05591p
           protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 259 GSRDIFQILAVRLNVFRMNKTEIKLLFALDDHRPRSLGGQASVTGRIYQQ 110
           G + +F+I++  L+  R+N+  +KLL        R+L GQ SV   I QQ
Sbjct: 288 GLKSVFEIMSSNLDEVRLNREALKLL--------RALAGQDSVKSHIVQQ 329


>AE013599-2646|AAF57729.1|  464|Drosophila melanogaster CG5721-PA
           protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 259 GSRDIFQILAVRLNVFRMNKTEIKLLFALDDHRPRSLGGQASVTGRIYQQ 110
           G + +F+I++  L+  R+N+  +KLL        R+L GQ SV   I QQ
Sbjct: 288 GLKSVFEIMSSNLDEVRLNREALKLL--------RALAGQDSVKSHIVQQ 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,503,919
Number of Sequences: 53049
Number of extensions: 526740
Number of successful extensions: 1019
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)