Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0185X.Seq
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.29 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 200  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 105
            W + P+  ++W   T +PWW    T    T R
Sbjct: 1035 WTTKPS--TWWSSTTTSPWWTTTTTRRTTTTR 1064



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -1

Query: 200  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 105
            W SS T   +W   T       RPT    T R
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 503 PHVPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKG 613
           PH  +Y+     H I  LD    D TD  M  +   G
Sbjct: 203 PHAKLYDYDLSSHVITILDWTKEDGTDKFMSHIHNDG 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,813
Number of Sequences: 336
Number of extensions: 2983
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)