Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0185X.Seq
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 4e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 4e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 181 4e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 181 4e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 1e-39
SB_54| Best HMM Match : Actin (HMM E-Value=0) 123 1e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 105 4e-23
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 81 7e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 71 8e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 5e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 36 0.027
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 34 0.11
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.0
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.3
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.3
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 29 2.3
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_52490| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 4.1
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 4.1
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 5.4
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 7.1
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 7.1
SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 7.1
SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.4
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_22242| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_38048| Best HMM Match : CUB (HMM E-Value=1.4e-31) 27 9.4
SB_13742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 9.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 182 bits (444), Expect = 2e-46
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIV+DSGDGVSHT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVP 165
Score = 161 bits (391), Expect = 4e-40
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 181 bits (441), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 158 bits (384), Expect = 3e-39
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAI+RLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 201
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 181 bits (441), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 158 bits (384), Expect = 3e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RRILTLKYPIEHGIIT 255
R ILTLKYPIEHGI+T
Sbjct: 62 RGILTLKYPIEHGIVT 77
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 181 bits (441), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 157 bits (380), Expect = 9e-39
Identities = 72/76 (94%), Positives = 75/76 (98%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RRILTLKYPIEHGIIT 255
R ILTLKYPIEHGI+T
Sbjct: 62 RGILTLKYPIEHGIVT 77
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 200
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 181 bits (441), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 165 bits (402), Expect = 2e-41
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 9e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 159 bits (387), Expect = 1e-39
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RRILTLKYPIEHGIIT 255
R ILTLKYPIEHGI+T
Sbjct: 62 RGILTLKYPIEHGIVT 77
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +3
Query: 366 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYP 515
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVP 127
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAI+RLDLAGRD TDYLMKILTE+GYSF
Sbjct: 126 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSF 163
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 123 bits (297), Expect = 1e-28
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +3
Query: 273 KIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 452
K+W H F ++LRV E+ PVL+TEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 453 ASGRTTGIVLDSGDGVSHTYP 515
ASGRTTG V D GDGVSHT P
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVP 2209
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VP+Y+GY LPHA R+DLAGRD T YL +++TE+GYSF
Sbjct: 2208 VPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSF 2245
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 147
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 109 bits (263), Expect = 1e-24
Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 NWDDMEKIWHHTF-YNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
NWDDM+ +W +TF +++ + P VL+TE PLNP NREKM ++MFE + +Y+AI
Sbjct: 81 NWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAI 140
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVL+LYA G TG+V+DSGDGV+H P
Sbjct: 141 QAVLTLYAQGLLTGVVIDSGDGVTHICP 168
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +1
Query: 40 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRR 213
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 214 ILTLKYPIEHGII 252
+L + YP+++GI+
Sbjct: 67 MLEVNYPMDNGIV 79
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +2
Query: 500 VPHV-PIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
V H+ P+YEG+ALPH RLD+AGRD T YL+K++ +GY+F
Sbjct: 163 VTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAF 204
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 105 bits (251), Expect = 4e-23
Identities = 44/65 (67%), Positives = 58/65 (89%)
Frame = +3
Query: 321 EDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 500
+ PVL+TEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 501 SHTYP 515
SH+ P
Sbjct: 186 SHSVP 190
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEG+A+PH+I+R D+AGRD + YL +L ++G+ F
Sbjct: 189 VPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = +3
Query: 387 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYP 515
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVP 43
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/39 (87%), Positives = 38/39 (97%)
Frame = +2
Query: 506 HVPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
+VPIYEGYALPHAILRLDLAGRD TDYLMK++TE+GYSF
Sbjct: 41 NVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSF 79
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
+WD EKI + + ++ P+L++EA N + REK+T++MFE +N PA ++
Sbjct: 11 DWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKN 70
Query: 435 AVLSLYASGRTTGIVLDSG 491
+VL+ +A+GR+ G+V+DSG
Sbjct: 71 SVLTAFANGRSNGLVIDSG 89
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDF 577
VP+++GY L AI+R LAG DF
Sbjct: 96 VPVHDGYVLQQAIVRSPLAG-DF 117
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 147
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 16 FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 186
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 187 GDEAQSKRRILTLKYPIEHGIITTGMT 267
GD A +K ++ L + + +GMT
Sbjct: 753 GDAAVAKSGVMHLN-QLSLSLYASGMT 778
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 432 QAVLSLYASGRTTGIVLDSG 491
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 144 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 28
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 35.9 bits (79), Expect = 0.027
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 IWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 455
I H F + L+V P + V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 456 SGRTTGIVLDS-GDGVSHTYPSTKVTL 533
+GIV DG + ST V L
Sbjct: 572 YSAVSGIVEQRVTDGTDEIH-STDVNL 597
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 500 VPHV-PIYEGYALPHAILRLDLAGRDFTDYLMKILTEK 610
V HV P+ EGY + I + +AGRD T ++ ++L E+
Sbjct: 72 VTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 8/38 (21%)
Frame = +3
Query: 426 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTYP 515
A +AVL+L AS RT TG V+DSGDGV+H P
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIP 77
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 199
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 363 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 479
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 121
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 468 TGIVLDSGDGVSHTYP 515
TG V+DSGDGV+H P
Sbjct: 356 TGCVIDSGDGVTHVIP 371
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 231 PHRARYHHNWDDMEKIWHHTFYNELRVAPEE 323
P R +WD ME+ W + LR PE+
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPED 331
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 366 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYPSTKVTLC 536
NR + +++ E S ++ + +L+LY RT D+ + HT P C
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTPGNNKREC 493
>SB_52490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 181 YVGDEAQSKRRILTLKYPIEHGIITTGMTWRRSGTTPSTMSCVSPP 318
Y G+ A++ RR T+ EH T + WR +SCV PP
Sbjct: 139 YYGEHARTPRRDFTMAGMREHRGET--LLWRTCENIAKKLSCVLPP 182
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +3
Query: 351 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYPSTKVT 530
+ PK ++ ++F F P M +A++ + A+G TGI+ H + +T+++
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGIIFTE----RHVFNNTEIS 229
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +3
Query: 426 AIQAVLSLYASGRTTGIVLDSGDGVSHTYPSTKVTLCPTP 545
AIQ V A RTTGI LD G + Y TK PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELD-GRRIRVDYSVTKRAHTPTP 247
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRRI 216
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 217 LTLKY--PIEHGII 252
L Y P + G +
Sbjct: 285 SALFYVLPFQKGFL 298
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 2 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 127
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 2 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 127
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 149 PWWRGRPTMDGKTARGASSPAKPALHMPEP 60
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3112
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 610 LLGEDLHEVVGKVATSQVQTEDGVGQSVTFVDGYVW--DTPSPESS 479
L G + V GK+ ++ G G+ +TF G W DTP+P S+
Sbjct: 1834 LSGPNKVGVCGKIKLDASRSFGGGGRRLTFSWGVAWASDTPTPTSA 1879
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4248
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 550 PSGLGWSRLYRLPHEDPHREG 612
PSGL W L+RL H++ G
Sbjct: 1490 PSGLKWLELFRLEHKETKENG 1510
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -2
Query: 442 STAWMATYMAGELKVSNMIWV---IFSLLALGL 353
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_22242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 604 GEDLHEVVGKVATSQVQTEDGVGQSVTFVDGYV-WDTPSPESS 479
GEDL+ V ++ S + + FV+ WD+P+P+SS
Sbjct: 364 GEDLNLVPNDISASVTHKRRRLKPDLEFVEKISRWDSPTPDSS 406
>SB_38048| Best HMM Match : CUB (HMM E-Value=1.4e-31)
Length = 551
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 396 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYPSTKVTLCPTPS 548
E FN Y +A+ S Y+ G D GD Y T+ C +PS
Sbjct: 106 ERFNGTLNYTYHKAIFS-YSVGMCGDGANDCGDNCDSNYEQTRQRSCTSPS 155
>SB_13742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/88 (25%), Positives = 30/88 (34%)
Frame = -3
Query: 273 SPCHPSCDDTVLDGVLQSEDTSLALGLVTHVGVFLAHTDHHALVARATHDGREDGAGRVV 94
+P +C V DT + VTHV AH D H TH R A R
Sbjct: 27 TPHRRTCRHATDTHVYAHADTHVDAHAVTHVD---AHADTHVDAHADTHATRYKHACRRT 83
Query: 93 AGETGLAHAGAIVDYKRSNIVVAHLELC 10
G H I ++++ + C
Sbjct: 84 CGHATYMHVDTIQSRMQTHMQTCYRHAC 111
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 19 KMCDDDVAALVVDNG-SGMCKAGFAGD 96
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 143 WRGRPTMDGKTARGASSPAKPALHMPEP 60
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,759,525
Number of Sequences: 59808
Number of extensions: 427184
Number of successful extensions: 1603
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -