Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0185X.Seq
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 181 4e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 181 4e-46
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 180 6e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 180 6e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 180 6e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 180 6e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 180 6e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 180 6e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 180 6e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 180 6e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 175 2e-44
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 165 2e-41
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 165 2e-41
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 164 5e-41
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 164 5e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 1e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 4e-16
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 33 0.17
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.51
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.5
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.0
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 29 3.6
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 29 3.6
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 4.7
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 28 4.7
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 6.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 6.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 6.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 6.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 6.2
AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical ... 28 6.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 27 8.2
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVP 165
Score = 165 bits (402), Expect = 2e-41
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 181 bits (440), Expect = 4e-46
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 35 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 95 AVLSLYASGRTTGVVLDSGDGVTHTVP 121
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +1
Query: 154 MVGMGQKDSYVGDEAQSKRRILTLKYPIEHGIIT 255
MVGMGQKDSYVGDEAQSKR ILTLKYPIEHGI+T
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 34
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVP 151
Score = 125 bits (301), Expect = 3e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 76 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRRILTLKYPIEHGIIT 255
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR ILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 150 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 180 bits (439), Expect = 6e-46
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTG+VLDSGDGV+HT P
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 175 bits (427), Expect = 2e-44
Identities = 78/87 (89%), Positives = 84/87 (96%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELR+APEE PVL+TEAPLNPK+NREKMTQIMFETFN+PAMYV IQ
Sbjct: 78 NWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLD+GDGV+HT P
Sbjct: 138 AVLSLYASGRTTGIVLDTGDGVTHTVP 164
Score = 155 bits (375), Expect = 3e-38
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RRILTLKYPIEHGIIT 255
R ILTLKYPIEHGI+T
Sbjct: 62 RGILTLKYPIEHGIVT 77
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAI RLDLAGRD TDY+MKILTE+GY+F
Sbjct: 163 VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 165 bits (402), Expect = 2e-41
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 165 bits (402), Expect = 2e-41
Identities = 76/78 (97%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 164 bits (398), Expect = 5e-41
Identities = 75/78 (96%), Positives = 77/78 (98%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRRILTLKYPIEHGIIT 255
SKR ILTLKYPIEHGI+T
Sbjct: 61 SKRGILTLKYPIEHGIVT 78
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (321), Expect = 1e-31
Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +3
Query: 225 EVPHRARYHHNWDDMEKIWHHTF-YNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFET 401
E P +NW DMEKIW + F ++L++ PEE PVL+T+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 402 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTYPSTK 524
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H P K
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVK 171
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +1
Query: 28 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 198
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 199 QSKRRILTLKYPIEHGII 252
+S R + +++YP+EHGI+
Sbjct: 62 ESNRGLFSIEYPMEHGIV 79
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPI +G+A+ HAI R+DLAGRD T+YL +L +GY F
Sbjct: 167 VPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 113 bits (271), Expect = 1e-25
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNE-LRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
NWDDM +W HTF E L + P+E +L+TE PLNP +NREKM Q+MFE + ++YVA+
Sbjct: 81 NWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAV 140
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVL+LYA G TG+V+DSGDGV+H P
Sbjct: 141 QAVLTLYAQGLLTGVVVDSGDGVTHICP 168
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRRIL 219
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R++L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 220 TLKYPIEHGII 252
+ YP+++GI+
Sbjct: 69 DINYPMDNGIV 79
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +2
Query: 500 VPHV-PIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
V H+ P+YEG+AL H RLD+AGRD T YL+K+L ++GY+F
Sbjct: 163 VTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.7 bits (220), Expect = 2e-19
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Frame = +3
Query: 231 PHRARYHHNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNS 410
P R +WD ME+ W + LR PE+ L+TE PLN NRE +IMFE+FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 411 PAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTYP 515
P +Y+A+QAVL+L AS + TG+V+DSGDGV+H P
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIP 186
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 165
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 166 GQKDSYVGDEAQSKRRI-LTLKYPIEHGII 252
D ++GDEA S T+KYPI HGI+
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIV 90
Score = 31.5 bits (68), Expect = 0.51
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYS 619
+P+ +GY + I + +AGRD T ++ +L ++ ++
Sbjct: 185 IPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
+W+ EKI H++ N L P E PVL +E+ N +A REK+T+IMFE F PA Y++
Sbjct: 101 DWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKN 160
Query: 435 AVLSLYASGRTTGIVLDSG 491
VLS +A GRT G+++DSG
Sbjct: 161 VVLSCFAQGRTHGLMVDSG 179
Score = 33.9 bits (74), Expect = 0.095
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 129
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEK 610
VP+++GYA+ HA+++ + G T+ L ++L ++
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 300 ELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 479
EL+V P + VL++ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 480 LDSGDGVS 503
+D G+ V+
Sbjct: 326 VDIGERVN 333
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 499 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 404
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRP 124
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 44 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 151
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 167 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 57
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 231 PHRARYHHNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNS 410
P Y NWD ++IW TF + V + +T+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 411 PAMYVAIQAVLSLYASGRTT----GIVLDSG 491
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 231 PHRARYHHNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNS 410
P Y NWD ++IW TF + V + +T+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 411 PAMYVAIQAVLSLYASGRTT----GIVLDSG 491
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 502 PTRTHLRRLRSAPRHPPSGLGWSRLYRLPHEDPHRE 609
P THLRR S+PR P+ S YR P PH E
Sbjct: 27 PPDTHLRR-SSSPRILPTPPPLSPEYRCPSAAPHLE 61
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +3
Query: 153 DGRYGPERLLRG*RGPEQETYPHSEVPHRARYHHNWDDMEKIWHHTFYNELRVAPEEDPV 332
+G P +G GP + H P +HH + + + APE P
Sbjct: 202 NGYMSPYDQAQGPSGPSYYSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPETKPT 261
Query: 333 LVTE--APLNPKANREKMTQIM 392
+ E +P +P+ +E++ +++
Sbjct: 262 HLVEPQSPKSPQNMKEELLRLL 283
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
D L++ +C GF G A + + G HQ + + + + D+ KR
Sbjct: 504 DSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKVLEDDKNVKR 563
Query: 211 RILTLK-----YPIEHGIITTGMTWRRSG 282
R L K I + II + +T+ SG
Sbjct: 564 RPLNSKMSYVFISIGYAIICSIVTFLHSG 592
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYVSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYVSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYVSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYVSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYVSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical
protein Y14H12B.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 300 ELRVAPEEDPVLVTEAPLNPKANREKMTQIMFET-FNSP 413
+L+ +ED ++V + NP N KM QI +T F P
Sbjct: 169 DLQEEEDEDEIIVIDQTSNPAINYPKMKQIAVKTEFQEP 207
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 76 KAGFAGDDAPRAVFPSIVGRPRHQG 150
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRPSWVALATRA 151
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 234 HRARYHHNWDDMEKIWHHTFYNE--LRVAPEEDPV 332
H + H+N D++ IWHH Y E L+ E +PV
Sbjct: 167 HFQQRHYN--DLQDIWHHARYKESQLKRGKELNPV 199
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 169 QKDSYVGDEAQSKRRILTLKYPIEHGIITTGMTWRRSGTTPSTMSC 306
++D +G E+ SKR+ +T+K I+ + T M R+ + C
Sbjct: 458 EEDGEIGAESTSKRKTVTIKEEIDEEVKQTPMAKLRASAKLNGKRC 503
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 169 QKDSYVGDEAQSKRRILTLKYPIEHGIITTGMTWRRSGTTPSTMSC 306
++D +G E+ SKR+ +T+K I+ + T M R+ + C
Sbjct: 458 EEDGEIGAESTSKRKTVTIKEEIDEEVKQTPMAKLRASAKLNGKRC 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,127
Number of Sequences: 27780
Number of extensions: 297075
Number of successful extensions: 1390
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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