Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0185X.Seq
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 183 1e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 183 1e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 183 1e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 1e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 9e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 156 1e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 156 1e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 121 4e-28
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 89 2e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 82 3e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 69 3e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 61 7e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 51 5e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 48 7e-06
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 41 6e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 41 6e-04
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 31 0.82
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.1
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 29 1.9
At5g13690.1 68418.m01594 alpha-N-acetylglucosaminidase family / ... 29 2.5
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 5.8
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 28 5.8
At5g09860.1 68418.m01140 nuclear matrix protein-related low simi... 27 7.7
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 7.7
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 7.7
At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identic... 27 7.7
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELR+APEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 80 NWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 137 bits (331), Expect = 6e-33
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGIIT 255
ILTLKYPIEHG+++
Sbjct: 65 GILTLKYPIEHGVVS 79
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEG++LPHAILRLDLAGRD TDYLMKILTE+GY F
Sbjct: 165 VPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 183 bits (445), Expect = 1e-46
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELR+APEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 80 NWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 137 bits (331), Expect = 6e-33
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGIIT 255
ILTLKYPIEHG+++
Sbjct: 65 GILTLKYPIEHGVVS 79
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEG++LPHAILRLDLAGRD TDYLMKILTE+GY F
Sbjct: 165 VPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELR+APEE PVL+TEAPLNPKANREKMTQIMFETFNSPAMYVAIQ
Sbjct: 80 NWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 137 bits (331), Expect = 6e-33
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGIIT 255
ILTLKYPIEHG+++
Sbjct: 65 GILTLKYPIEHGVVS 79
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEG++LPHAILRLDLAGRD TDYLMKILTE+GY F
Sbjct: 165 VPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMF 202
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +3
Query: 252 HNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 79 NNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 138
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 139 QAVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 138 bits (335), Expect = 2e-33
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGII 252
ILTLKYPIEHGI+
Sbjct: 65 GILTLKYPIEHGIV 78
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TD+LMKILTE+GYSF
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +3
Query: 252 HNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 79 NNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 138
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 139 QAVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 138 bits (335), Expect = 2e-33
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGII 252
ILTLKYPIEHGI+
Sbjct: 65 GILTLKYPIEHGIV 78
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TD+LMKILTE+GYSF
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSF 202
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = +3
Query: 252 HNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+NWDDMEKIWHHTFYNELRVAPEE P+L+TEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 79 NNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 138
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 139 QAVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 138 bits (335), Expect = 2e-33
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGII 252
ILTLKYPIEHGI+
Sbjct: 65 GILTLKYPIEHGIV 78
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TD LMKILTE+GYSF
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 83/87 (95%), Positives = 85/87 (97%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 80 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 139 bits (336), Expect = 2e-33
Identities = 63/75 (84%), Positives = 69/75 (92%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGIIT 255
ILTLKYPIEHGI++
Sbjct: 65 GILTLKYPIEHGIVS 79
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TDYLMKILTE+GYSF
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 202
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = +3
Query: 252 HNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+NWDDMEKIWHHTFYNELRVAPEE P+L+TEAPLNPKANREKMTQIMFETFN+PAMYVAI
Sbjct: 79 NNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAI 138
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
QAVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 139 QAVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 138 bits (335), Expect = 2e-33
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGII 252
ILTLKYPIEHGI+
Sbjct: 65 GILTLKYPIEHGIV 78
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TD LMKILTE+GYSF
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF 202
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 4e-46
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELRVAPEE PVL+TEAPLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 80 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ 139
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLYASGRTTGIVLDSGDGVSHT P
Sbjct: 140 AVLSLYASGRTTGIVLDSGDGVSHTVP 166
Score = 139 bits (336), Expect = 2e-33
Identities = 63/75 (84%), Positives = 69/75 (92%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 211 RILTLKYPIEHGIIT 255
ILTLKYPIEHGI++
Sbjct: 65 GILTLKYPIEHGIVS 79
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD TD LMKILTE+GY F
Sbjct: 165 VPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMF 202
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 166 bits (404), Expect = 9e-42
Identities = 73/87 (83%), Positives = 80/87 (91%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIWHHTFYNELR+ PEE P+L+TEAPLNPK NREKMTQIMFE+F P+MY+ IQ
Sbjct: 81 NWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQ 140
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVLSLY+SGRTTGIVLDSGDGVSHT P
Sbjct: 141 AVLSLYSSGRTTGIVLDSGDGVSHTVP 167
Score = 129 bits (311), Expect = 2e-30
Identities = 55/75 (73%), Positives = 69/75 (92%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 210
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 211 RILTLKYPIEHGIIT 255
IL+LKYPIEHG+++
Sbjct: 66 GILSLKYPIEHGVVS 80
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VPIYEGYALPHAILRLDLAGRD T+YL KI+ E+GY++
Sbjct: 166 VPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTY 203
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 156 bits (379), Expect = 1e-38
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDMEKIW+HTFY+ELRVAPEE PVL+TEAPLNPKA+REKMTQIMFETF P+MY+ +Q
Sbjct: 35 NWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQ 94
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
A LSL+ASGRTTG VLDSGDGVS+ P
Sbjct: 95 AALSLHASGRTTGTVLDSGDGVSYIVP 121
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYS 619
VPIYEG ALPHAILRLDLAGR T+YLMKI+ E+GY+
Sbjct: 120 VPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYT 156
Score = 48.4 bits (110), Expect = 4e-06
Identities = 18/34 (52%), Positives = 28/34 (82%)
Frame = +1
Query: 154 MVGMGQKDSYVGDEAQSKRRILTLKYPIEHGIIT 255
MVGM + D +VGD+A+++ ILTL YP+EHG+++
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVS 34
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 156 bits (378), Expect = 1e-38
Identities = 69/88 (78%), Positives = 80/88 (90%)
Frame = +3
Query: 252 HNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+NWDDMEKIWH+TFYNELRV PEE PVL+TEAP NPKANREKMTQIMFE+F+ PAMYV++
Sbjct: 68 NNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSM 127
Query: 432 QAVLSLYASGRTTGIVLDSGDGVSHTYP 515
Q+VL LY+SGRTTG+VLD G+ VSHT P
Sbjct: 128 QSVLYLYSSGRTTGVVLDLGERVSHTVP 155
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRRILTL 225
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 226 KYPIEHGII 252
K P+EHGI+
Sbjct: 59 KDPMEHGIV 67
Score = 70.5 bits (165), Expect = 8e-13
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYSF 622
VP+YEGYALPH ILRLDL GRD TDYL++I+TE+GY++
Sbjct: 154 VPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTY 191
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 121 bits (291), Expect = 4e-28
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
NWDDME +W H FYNEL++ P + +L+T+ PLNP NREKM + MFE +N +++ IQ
Sbjct: 79 NWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQ 138
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
AVL+LYA G TG+V+DSGDGV+H P
Sbjct: 139 AVLTLYAQGLLTGLVIDSGDGVTHVVP 165
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 204
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 205 KRRILTLKYPIEHGII 252
R L + YP+ +GI+
Sbjct: 62 LRHQLDINYPVHNGIV 77
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKGYS 619
VP+ +GY+ PH R+++AGR T YL+ +L+ +GY+
Sbjct: 164 VPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYA 200
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 89.0 bits (211), Expect = 2e-18
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
+WD ME+ W +N LR PE+ L+TE+PL P +RE +I+FETFN P +Y+A+
Sbjct: 97 DWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVN 156
Query: 435 AVLSLYASGRT-----TGIVLDSGDGVSHTYP 515
+VL+L A T TG+V+D GDG +H P
Sbjct: 157 SVLALAAGYTTSKCEMTGVVVDVGDGATHVVP 188
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Frame = +1
Query: 43 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 168
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 169 QKDSYVGDEAQSKRRILT---LKYPIEHG 246
D Y+GDEA +K R + L YPIEHG
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHG 93
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILTEKG 613
VP+ EGY + I + +AG+D T ++ +++ E+G
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 434
+WD ++ IW H F + L + P E P+L+ E PLN + REK ++MFE + PA+++A
Sbjct: 102 DWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKN 161
Query: 435 AVLSLYASGRTTGIVLDSGDGVSHTYP 515
VL+ +A+GR T +V+D G G + P
Sbjct: 162 PVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 132
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 512 PIYEGYALPHAILRLDLAGRDFTDYLMKILTEKG 613
P+++GY L A++ L G TD L+K L KG
Sbjct: 188 PVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAP-EEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAI 431
+WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN Y +
Sbjct: 65 DWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASE 124
Query: 432 QAVLSLYASGRTTGIVLDSGDG 497
QAVLSLYA GR +G +D G G
Sbjct: 125 QAVLSLYAVGRISGCTVDIGHG 146
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 43 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 135
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 201
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 202 SKRRILT 222
KR++ T
Sbjct: 65 GKRKLYT 71
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 255 NWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREK 377
+WD ++ +W H F N L + P E P+L+ E PLN + REK
Sbjct: 96 DWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 246 YHHNWDDMEKIWHHTFYNELRVAPEEDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYV 425
Y N D +IW H F + L +AP +L+TEAPL+ + + +++FE F ++Y+
Sbjct: 69 YLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYI 128
Query: 426 A-IQAVLSLYASGRTTGIVL 482
A Q+++ LY + R +L
Sbjct: 129 AHPQSLVHLYEASRQPDSIL 148
Score = 37.1 bits (82), Expect = 0.009
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 509 VPIYEGYALPHAILRLDLAGRDFTDYLMKILT 604
VP+ + L HAI R+DL G+ FT+YL ++++
Sbjct: 167 VPVLHNFTLNHAIKRIDLGGKAFTNYLKELVS 198
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 138
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = +3
Query: 321 EDPVLVTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLD 485
+ P+L+TE NP +R KM +++FET+ PA+ + A S L+ + GIVL
Sbjct: 116 DHPILITECACNPVQSRSKMAELLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLC 175
Query: 486 SGDGVSHTYP 515
G +H+ P
Sbjct: 176 PGFTTTHSIP 185
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 192
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Frame = +3
Query: 288 TFYNELRVAPEEDPVLVTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 437
T + ++V P P++V+ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 438 VLSLYASGRTTGIVLDSG 491
VL+LYA+ RT+GIV++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Frame = +3
Query: 288 TFYNELRVAPEEDPVLVTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 437
T + ++V P P++V+ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 438 VLSLYASGRTTGIVLDSG 491
VL+LYA+ RT+GIV++ G
Sbjct: 241 VLALYAARRTSGIVVNIG 258
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 383 GHLLPVGLGVEGGFGDQHGVLLGGDTQLIVEGVVPD 276
G+ + VG+G+ GG GD GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 143 WRGRPTMDGKTARGASSPAKPA--LHMPEPL 57
WR T G+ + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 22.6 bits (46), Expect(2) = 1.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 338 DQHGVLLGGDTQLIVEGVVPDLLHVIPVVMI 246
D GV +GG + + E ++ D+ +P+ I
Sbjct: 15 DVDGVGVGGGLESLPEDIIADIFSRLPISSI 45
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 5 HTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 136
H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 185 HSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At5g13690.1 68418.m01594 alpha-N-acetylglucosaminidase family /
NAGLU family contains Pfam profile: PF05089
alpha-N-acetylglucosaminidase (NAGLU)
Length = 806
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 156 GRYGPERLLRG*RGPEQETYPHSEVPHRARYHHNWD 263
GR GPE L++G G E + H + ++ H +WD
Sbjct: 89 GRIGPEILIKGTTGVEIASGLHWYLKYKCNAHVSWD 124
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 149 PWWRGRPTMDG--KTARGASSPAKPALHM 69
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 395 KHDL-GHLL--PVGLGVEGGFGDQHGVLLGGDTQLIVEGVVPDLL 270
+HDL GHLL P+G+ EG + G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At5g09860.1 68418.m01140 nuclear matrix protein-related low
similarity to nuclear matrix protein p84 [Homo sapiens]
GI:550058
Length = 599
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 592 HEVVGK---VATSQVQTEDGVGQSVTFVDGYVWDTPSPE 485
HE G V+ S+ + E G G + T + DTP+PE
Sbjct: 519 HETEGNQIGVSNSEAEAEGGRGDAETMESDAIADTPTPE 557
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.5 bits (58), Expect = 7.7
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 208 RRILTL 225
+ L
Sbjct: 89 KTFAVL 94
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRP 124
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identical
to SP|Q9ZWM9 DNA-binding protein RAV1 {Arabidopsis
thaliana}, RAV1 GI:3868857 from [Arabidopsis thaliana]
Length = 344
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 435 AVLSLYASGRTTGIVLDSGDGV---SHTYPSTKVT-LCPTPSSVW 557
+V +LY G + +VLDS +GV S PS+K + P P+ W
Sbjct: 29 SVGNLYRMGSGSSVVLDSENGVEAESRKLPSSKYKGVVPQPNGRW 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,533,818
Number of Sequences: 28952
Number of extensions: 290256
Number of successful extensions: 1137
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -