Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0184.Seq
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.3  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 544 MAGTLKDRSPGLKEPAPEAPAEGLSSSGGARSQPALP 654
           M G + + SP    PAP++ A  +SSSG      A P
Sbjct: 2   MNGGIYEESP---PPAPQSAATPISSSGMTSPAAAPP 35


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 580 KEPAPEAPAEGLSSSGGARSQPALP 654
           +EP PEA    L S   +R+ PA P
Sbjct: 262 REPLPEAYFPKLDSLVASRTWPARP 286


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -2

Query: 421 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 302
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/64 (20%), Positives = 30/64 (46%)
 Frame = -2

Query: 439 AVIVFRVHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIFIRSLVF 260
           +++   +  ++  FS +TV+  +   +++ C+L +K      LV    TF      +L +
Sbjct: 63  SIVAMVMGTIVNAFSCYTVLAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTY 122

Query: 259 VFFA 248
           +  A
Sbjct: 123 LLVA 126


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 122 PWRSPESAQLKPHTGNH 172
           PW +    Q+K  +GNH
Sbjct: 141 PWFAEHMGQIKVASGNH 157


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 261 LSSLLGCRWEGTLRV*AASRPS-SLYHRVSRWLPVWGLS*ALSG 133
           L++++GC  +GT+     SRP+  +   V R+   W L  A  G
Sbjct: 242 LATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWYLPFAQFG 285


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 261 LSSLLGCRWEGTLRV*AASRPS-SLYHRVSRWLPVWGLS*ALSG 133
           L++++GC  +GT+     SRP+  +   V R+   W L  A  G
Sbjct: 242 LATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWYLPFAQFG 285


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 395 AEVTKDCMDPEDDDGMIPY 451
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 395 AEVTKDCMDPEDDDGMIPY 451
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 388 TVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 278
           T  K L   K+ V  L      +F+L   + TF +IF
Sbjct: 80  TKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,713
Number of Sequences: 336
Number of extensions: 2541
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)