Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0184.Seq
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 57 1e-08
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 2e-06
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 2e-06
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 50 2e-06
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 48 8e-06
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 48 8e-06
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 48 1e-05
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 48 1e-05
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 43 2e-04
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 40 0.002
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 40 0.002
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 40 0.003
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 35 0.075
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 33 0.30
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 32 0.40
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 32 0.53
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 32 0.53
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 31 0.92
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 30 2.1
SB_44266| Best HMM Match : PCI (HMM E-Value=0.047) 30 2.1
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 29 3.7
SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6) 29 4.9
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 29 4.9
SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013) 29 4.9
SB_38235| Best HMM Match : Pox_A32 (HMM E-Value=0.32) 28 6.5
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 28 6.5
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +2
Query: 284 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 463
F+EC K++D+N NGL+ AEL H L +LG+KL D EV + + ED+ G + Y F+
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNL---MVGFEDNQGQVFYEDFV 63
Query: 464 KKVM 475
+ VM
Sbjct: 64 RAVM 67
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+++ KD + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 74 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 131
Query: 428 DDDGMIPY 451
D DG + Y
Sbjct: 132 DGDGQVNY 139
Score = 36.3 bits (80), Expect = 0.025
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 30 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 173
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 49
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 281 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 460
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 461 L 463
L
Sbjct: 70 L 70
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+++ K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 428 DDDGMIPY 451
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 34.7 bits (76), Expect = 0.075
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 72 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 173
AFS++D +G G I LG ++R+L NPT A +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 284 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 463
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+++ K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 428 DDDGMIPY 451
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 34.7 bits (76), Expect = 0.075
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 72 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 173
AFS++D +G G I LG ++R+L NPT A +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 284 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 463
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+K+ +Q + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ +
Sbjct: 38 AKKMGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA--DI 95
Query: 428 DDDGMIPY 451
D DG + Y
Sbjct: 96 DGDGQVNY 103
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 260 KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDG 439
K + + EDF++ L+++D + +G++ EL H L LGEKL DSEV + + ED G
Sbjct: 80 KPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQGL---EDKQG 136
Query: 440 MIPYAAFLKKVM 475
I F+ V+
Sbjct: 137 QIDCEEFILSVL 148
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 36 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 173
+L+ D+ + +F +YD +G KID+ LG++LR L NPT A +
Sbjct: 4 NLTDKDIRQLRESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEV 49
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 290 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 463
E +LYDK + + ++L L LG+ ++EV ++ + MDPE + I + FL
Sbjct: 15 ESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSE-MDPEGGN-RISFEEFL 70
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 PSHLQP-SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 406
P LQ +K+ K+ E+ + K++DKN +G++ +EL + LGE+L D EV E+
Sbjct: 346 PEFLQMVAKKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMI 405
Query: 407 KDCMDPEDDDGMIPY 451
++ D DGMI Y
Sbjct: 406 REA--DIDGDGMIDY 418
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/102 (22%), Positives = 51/102 (50%)
Frame = +2
Query: 167 NHRETRWYKEEGREAAHTRRVPSHLQPSKEDKDQGAYEDFLECLKLYDKNENGLMLGAEL 346
N+++ R ++ GR+ ++ + +E + + E L+DK+ G + +EL
Sbjct: 254 NNQKYRNFRLNGRKPLSKNQL-LEISSVREKLSEEQVAELKEAFALFDKDGGGSISSSEL 312
Query: 347 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKV 472
H + +LG+ + E+ ++ + +DD+G I + FL+ V
Sbjct: 313 AHVMRSLGQNPTEQELKDMIAEV--DQDDNGEIDFPEFLQMV 352
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +2
Query: 254 EDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 433
+ K G+ ++F+E L+++D++ G +L AEL L++LGEKL D EV + +D
Sbjct: 581 QKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPV---DDS 637
Query: 434 DGMIPY 451
G I Y
Sbjct: 638 SGHINY 643
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 72 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXXFLPIYSQ 248
AFS++D G GKI+ +G LLR+L NPT A + FLPIY+
Sbjct: 519 AFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTS 578
Query: 249 AKKTK 263
A + K
Sbjct: 579 AYQKK 583
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 239 LQPSKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 418
L S K QG E+F+E L+ +D N +G M A+L + L +LG+ L + + +
Sbjct: 68 LYVSYSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAI----V 123
Query: 419 DPEDDDGMIPYAAFLKKVMA 478
+D+ G I Y + KVMA
Sbjct: 124 ALQDNHGTIEYEKLVDKVMA 143
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 30 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 173
M DL+ + AFS++D GKG IDA + D+LRA+ NP + I
Sbjct: 1 MVDLNDEQIGELKDAFSLFDKTGKGYIDADIVIDVLRAVGLNPQIDDI 48
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 42/74 (56%)
Frame = +2
Query: 251 KEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 430
K+ + + A + E +++D+N +G + EL + +LGEKL D E+ E+ ++ D
Sbjct: 64 KQMQHRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREA--DLD 121
Query: 431 DDGMIPYAAFLKKV 472
DG+I + F++ V
Sbjct: 122 GDGVINFQEFVQMV 135
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 302 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 463
L+DK+ +G + EL + +LG+ D E+ ++ ++ D +G + + FL
Sbjct: 8 LFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEV--DADGNGEVDFEEFL 59
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +2
Query: 278 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 457
E ++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y
Sbjct: 356 ESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYEN 412
Query: 458 FLKKVM 475
+K+V+
Sbjct: 413 MVKEVL 418
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 36 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 215
++ + D + F +YD G KID LG +LRA NPT + +
Sbjct: 273 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV--RKVERDFGKSAM 330
Query: 216 XXXXFLPIY-SQAKKTKTRERMKISWNV*SC 305
FLPIY S + T E+ S +V C
Sbjct: 331 AFDEFLPIYHSVTQHCLTTEKKVSSESVIDC 361
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +2
Query: 278 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 457
E ++C K +D++++G + + L H L +LGE+L D E ++ ++ G I Y
Sbjct: 88 ESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEEFDALSSGYVNAR---GEIDYEN 144
Query: 458 FLKKVM 475
+K+V+
Sbjct: 145 MVKEVL 150
Score = 35.1 bits (77), Expect = 0.057
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 36 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 215
++ + D + F +YD G KID LG +LRA NPT + +
Sbjct: 5 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEV--RKVERDFGKSAM 62
Query: 216 XXXXFLPIY-SQAKKTKTRERMKISWNV*SC 305
FLPIY S + T E+ S +V C
Sbjct: 63 AFDEFLPIYHSVTQHCLTTEKKVSSESVIDC 93
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +2
Query: 251 KEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 430
K +KD + E+ L+ KL+D +E G + L LGE L D E+ E+ + D
Sbjct: 52 KSEKD--SKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA--DRD 107
Query: 431 DDGMIPYAAFLK 466
DG I A FL+
Sbjct: 108 GDGEINEAEFLR 119
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 3 GGNRKTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNL 125
GG RK +L++ + AF ++D +G G IDA L
Sbjct: 11 GGQRKKTGPKPELTEEQKQEIREAFDLFDTDGSGTIDAKEL 51
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+ + K+ D E L+DK+ NGL+ E+ +G + + E E+ K
Sbjct: 78 ASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQA--DM 135
Query: 428 DDDGMIPYAAFLKKVMA 478
D DG I Y F M+
Sbjct: 136 DGDGHINYEEFKNAFMS 152
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 248 SKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 427
+ + K+ D E L+DK+ NGL+ E+ L +G + + E E+ K
Sbjct: 207 ASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA--DI 264
Query: 428 DDDGMIPY 451
D DG I Y
Sbjct: 265 DGDGHINY 272
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 30 MSDLSKNDVERASF--AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
M+ SKND + AFS++D +G G I A + +L + N T
Sbjct: 206 MASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNIT 251
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 36.3 bits (80), Expect = 0.025
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 43 ARTTLKGRL-SPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSH 219
+RT+L R S + + + K RS + + S +++ R RRR+RS SH
Sbjct: 640 SRTSLSSRSRSRDRGGSRRGKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRSRRRSRSSSH 699
Query: 220 SKSSFPSTAKQRRQRPGSV*RFPGMSEAV*QERKRSHAW 336
S SS + + R R R S + +R+RS +W
Sbjct: 700 SSSSLSRSRSRSRSRGRGRRRSRSRSSSRKGKRQRSRSW 738
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 39 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
LSK + AF+++D + G I + LG ++RAL NPT
Sbjct: 4 LSKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPT 44
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +1
Query: 37 TSARTTLKGRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCS 216
TS+ T+ K + SPS+S+ K +S+P ++A S +T + QPS NS +R + S
Sbjct: 345 TSSLTSRKSQ-SPSKSSGSSQKKQSLPPSIATSSVGIKRTKNPQPSLNSSSERLHTKRSS 403
Query: 217 HSKSSFPSTAKQRRQRP 267
S+ K R +RP
Sbjct: 404 LVPLE-KSSDKLRVKRP 419
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 278 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 457
E+ + +++D+N +G + EL + LG+ L E E+ M +D DG + Y
Sbjct: 217 ENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIG--MLDQDGDGKLGYEE 274
Query: 458 FL 463
F+
Sbjct: 275 FV 276
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = +2
Query: 227 VPSHLQPSKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVT 406
+P + + SK K A EDFLE LK++D+ NG + L G+K+ + E +
Sbjct: 66 LPIYTEFSK--KKPPAKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEEADAIL 123
Query: 407 KDCMDPEDDDGMIPYAAFLKKVMA 478
D G + Y + VMA
Sbjct: 124 AGHEDTV--KGEVDYNELIDFVMA 145
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 48 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
+++ + AF +D +G G I LG ++R+L NPT
Sbjct: 45 DNISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPT 82
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 6 GNRKTPHKMSDLSKNDVERASFAFSIY 86
GN T +MSD+ ++D++ AS+AFSI+
Sbjct: 87 GNNLTTSEMSDIYESDIDPASWAFSIW 113
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 72 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
AF +D +G G I LG ++R+L NPT
Sbjct: 5 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 34
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 272 AYEDFL-ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIP 448
A ED L + ++ D+++ G + ELT + GE EV E+ +DPE G+I
Sbjct: 59 APEDQLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPE--KGVIF 116
Query: 449 YAAFL 463
Y F+
Sbjct: 117 YKDFV 121
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 290 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 466
+ ++DK+ +G + EL + LGE D E+ ++ D +D G I +A F++
Sbjct: 7 DVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADA--DKDGSGEIRFAQFMQ 63
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 169 PSRNSVVQRRRARSCSHSKSSFPSTAKQRRQRP 267
PSR+S +R SH+ S+ ST + RR+ P
Sbjct: 42 PSRSSFTDGKRNTQASHNALSYMSTGRARRKSP 74
>SB_44266| Best HMM Match : PCI (HMM E-Value=0.047)
Length = 205
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 173 RETRWYKEEGREAAHTRRVPSHLQPSKEDKDQGAYEDFLECLKLYDKNENGLMLGAELTH 352
RE + +E+ R R+ + + KE++++ AYE++L + E G+ E
Sbjct: 31 REEQRKREDERRKREEERLEAEEKARKEEEERKAYEEYLAMRNAFSVEEEGVGETEEENQ 90
Query: 353 TLL 361
LL
Sbjct: 91 ALL 93
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/45 (22%), Positives = 28/45 (62%)
Frame = +3
Query: 12 RKTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRAL 146
++TP + + +++++YDFEG+G++ +L +L++++
Sbjct: 240 KETPECGMSVKSASSDHQEWSYTLYDFEGQGQVTREDLRNLVKSI 284
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = +1
Query: 13 EKHHTK*ATSARTTLKGRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQ 192
E +TK A + + + + S +++ K+ +R S+LA S + TQT + +PS S
Sbjct: 4 EAKNTKPAAMSMDSFRAKKGTSSTSSPKS-SRPGRSSLASSTDSITQTSNARPSSASKPS 62
Query: 193 RRRARSCSHSKSSFPSTAKQRRQRPGSV*RFPGMSEAV*QERKRSHAWR 339
R RS S + + +QRR + M E +ERKR + R
Sbjct: 63 NSRTRSA--SVENLDMSLQQRRD------KVKQMREKQAEERKRKNEER 103
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 42 SKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNP 158
S+ +E AFS+Y+ +G I + +L+R+L NP
Sbjct: 222 SREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNP 260
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 624 RWRPQPARAPNHVDIPYNILDTDKP 698
RWR + +RAPNH + N LD KP
Sbjct: 758 RWRRE-SRAPNHPRLDLNTLDESKP 781
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 29.1 bits (62), Expect = 3.7
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 13 EKHHTK*ATSARTTLKGRLSPSQSTTLKAK-ARSMPSTLAIS*ERSTQTPHWQPSRNSVV 189
+K T TS +T+ K L+ S+ T+ K RS+ ++ S + S +T + SRN+
Sbjct: 92 DKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDR-KKSRNTSP 150
Query: 190 QRRRARSCSHSKSSFPSTA 246
+R S S + P T+
Sbjct: 151 KRSPKTSSKSSPKTSPKTS 169
>SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6)
Length = 297
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 6 GNRKTPHKMSDLSKNDVERASFAFSIY 86
GN T +SD+ ++D+ AS+AFSI+
Sbjct: 44 GNNLTTSDISDIYESDINPASWAFSIW 70
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 57 ERASFAFSIYDFEGKGKIDAFNLGDLLRAL 146
E+ +AFS+YD +G G I + +++RA+
Sbjct: 99 EKLKWAFSMYDLDGNGYISRQEMLEIVRAI 128
>SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013)
Length = 1124
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 624 RWRPQPARAPNHVDIPYNILDTDKP 698
RWR + +RAPNH+ N LD KP
Sbjct: 811 RWRRE-SRAPNHLRPDLNTLDESKP 834
>SB_38235| Best HMM Match : Pox_A32 (HMM E-Value=0.32)
Length = 651
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 624 RWRPQPARAPNHVDIPYNILDTDKP 698
RW P+ +RAPNH N LD KP
Sbjct: 582 RW-PRESRAPNHPRPDLNTLDESKP 605
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 72 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
AF +YD +G G + L +R L NPT
Sbjct: 153 AFHMYDADGSGHVTTKELHKAMRTLGFNPT 182
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 9 NRKTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 161
+R T + + ++ ++ AF++ D G ID +L D+L +L +PT
Sbjct: 15 HRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,015
Number of Sequences: 59808
Number of extensions: 370546
Number of successful extensions: 1244
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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