Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0181.Seq
(804 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p pro... 62 7e-10
AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-P... 62 7e-10
BT001860-1|AAN71623.1| 236|Drosophila melanogaster RH66388p pro... 32 0.80
AE013599-615|AAF59115.1| 236|Drosophila melanogaster CG14756-PA... 32 0.80
BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p pro... 30 3.2
AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcriptio... 30 3.2
AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD... 30 3.2
AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA... 30 3.2
AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC... 30 3.2
AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB... 30 3.2
AE014296-3024|AAF49258.2| 427|Drosophila melanogaster CG7271-PA... 29 7.4
AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptio... 29 9.8
AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptio... 29 9.8
>AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p
protein.
Length = 391
Score = 62.5 bits (145), Expect = 7e-10
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 79 FLRASGWTEAVFPQANVRKALKTIFDNNVMKFKGGKMGAVNGFVAEGRGTCTPSRCRARG 258
+L++ G+ ++P+ NVR ALK I+DNNVM F G +GA NGF+A P
Sbjct: 289 YLKSCGFDYEIYPKENVRTALKRIYDNNVMGFHEGNIGAANGFIANASEPTKPGHVDNSN 348
Query: 259 LDRSHVRPGLAHGL 300
+ V PG+ + L
Sbjct: 349 IQAEEVWPGVVYAL 362
>AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-PB
protein.
Length = 948
Score = 62.5 bits (145), Expect = 7e-10
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 79 FLRASGWTEAVFPQANVRKALKTIFDNNVMKFKGGKMGAVNGFVAEGRGTCTPSRCRARG 258
+L++ G+ ++P+ NVR ALK I+DNNVM F G +GA NGF+A P
Sbjct: 805 YLKSCGFDYEIYPKENVRTALKRIYDNNVMGFHEGNIGAANGFIANASEPTKPGHVDNSN 864
Query: 259 LDRSHVRPGLAHGL 300
+ V PG+ + L
Sbjct: 865 IQAEEVWPGVVYAL 878
>BT001860-1|AAN71623.1| 236|Drosophila melanogaster RH66388p
protein.
Length = 236
Score = 32.3 bits (70), Expect = 0.80
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 174 QRGQNGRRERICGRRKGHVHTVALQSERSGSESRTA 281
+RG+ G+R+R +R GH +++R G +++TA
Sbjct: 188 KRGRRGQRKRTPSKRSGHKRRTGSKTKRQGQKNKTA 223
>AE013599-615|AAF59115.1| 236|Drosophila melanogaster CG14756-PA
protein.
Length = 236
Score = 32.3 bits (70), Expect = 0.80
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 174 QRGQNGRRERICGRRKGHVHTVALQSERSGSESRTA 281
+RG+ G+R+R +R GH +++R G +++TA
Sbjct: 188 KRGRRGQRKRTPSKRSGHKRRTGSKTKRQGQKNKTA 223
>BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p
protein.
Length = 2062
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcription
factor protein.
Length = 2061
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD,
isoform D protein.
Length = 1751
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA,
isoform A protein.
Length = 1776
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC,
isoform C protein.
Length = 2062
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB,
isoform B protein.
Length = 2062
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 434 GRVVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
G VVVST + + L +TTS+ ++ + G K NT
Sbjct: 134 GGVVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AE014296-3024|AAF49258.2| 427|Drosophila melanogaster CG7271-PA
protein.
Length = 427
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 550 CNVNAPPILRFNKFKVSSIVTTAATLFNPKRITASLQKL 434
CN N PP +R N + + TT P I+ +LQ+L
Sbjct: 244 CNGNFPPNMRVNLYGLQQCKTTKELYVVPYHISETLQQL 282
>AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1751
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 428 VVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
VVVST + + L +TTS+ ++ + G K NT
Sbjct: 136 VVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
>AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1773
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 428 VVVSTHADSQEVLTFTTSFPLSFVYRGEEFKKNT 327
VVVST + + L +TTS+ ++ + G K NT
Sbjct: 136 VVVSTGSTGTQTLQYTTSYSVASIQAGGTLKANT 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,675,712
Number of Sequences: 53049
Number of extensions: 846714
Number of successful extensions: 2111
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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