Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0179.Seq
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 46 7e-06
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 42 9e-05
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 40 4e-04
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 35 0.013
SPAC29B12.12 |||helper of TIM |Schizosaccharomyces pombe|chr 1||... 33 0.031
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 33 0.041
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 33 0.054
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 32 0.095
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.38
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.67
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.5
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 28 1.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 1.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.0
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 2.7
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 2.7
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 27 2.7
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 3.6
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 27 3.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 26 4.7
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 26 6.2
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 6.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 6.2
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 8.2
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 25 8.2
SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase Ceg1|Schizosacc... 25 8.2
SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|... 25 8.2
SPCC576.14 |||diphthine synthase |Schizosaccharomyces pombe|chr ... 25 8.2
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 8.2
SPAC18B11.08c |||conserved fungal protein|Schizosaccharomyces po... 25 8.2
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 300 CEKCARPVYAMERIKAERRVWHKDCFRCVQCNKQL---TVETYQSDHTTLYCK 449
C KC V + ++ + WH DCF+CV CNK+L + + Q D ++CK
Sbjct: 24 CIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSSEDFSQDDQKQIFCK 76
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 41.9 bits (94), Expect = 9e-05
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +3
Query: 276 SDGESNPKCEKCARPVYAME-RIKAERRV-----WHKDCFRCVQCNKQLTVETYQSDHTT 437
SDG P C CA A RIK + +H++CFRC C KQ+ ++ D+ T
Sbjct: 65 SDGR--PVCSSCAHTCTACRMRIKDYALMSGYDSYHRECFRCHDCRKQIIDSNFKRDNRT 122
Query: 438 LYCKPHFKHLFEPKPVEDDDEIDAH 512
++C K + P D+ D H
Sbjct: 123 IFCN-DCKQVRHPSR-SSDESADYH 145
Score = 33.9 bits (74), Expect = 0.023
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 300 CEKCARPVYAMER-IKAERRVWHKDCFRCVQCNKQL 404
C +C + E I +WHKDCF C +C+K L
Sbjct: 19 CFRCGQAFQRRETPISFGGHMWHKDCFCCTKCDKGL 54
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 279 DGESNPKCEKCARPVYAMERIKAERRVWHKDCFRCVQCNKQLTVETYQSDHTTLYCKP 452
D + KC+KC +P+ + +K +H C+ C CN L E Y T C+P
Sbjct: 371 DNKYAVKCKKCRKPILGIS-VKGSDGEYHSQCWTCGACNALLGDEGYFMIENTPICRP 427
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 282 GESNPKCEKCARPVYAMERIKAERRVWHKDCFRCVQCNKQLTVETYQSDHTTLYCKPHFK 461
G S C C + A I A + H CF+C C++ L + YC +
Sbjct: 252 GNSEKSCHSCGGSLRAGRIISASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYH 311
Query: 462 HLFEPK 479
F P+
Sbjct: 312 EQFSPR 317
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 34.7 bits (76), Expect = 0.013
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 288 SNPKCEKCARPVYAMERIKAERRVWHKDCFRCVQCNKQLTVETYQSDHTTL 440
S+ C C + V + + ++A ++H +CFRC CN + + + D TL
Sbjct: 112 SSKICASCGQ-VISGQYVRALGNIYHLECFRCHDCNSLVASKFFPIDDPTL 161
>SPAC29B12.12 |||helper of TIM |Schizosaccharomyces pombe|chr
1|||Manual
Length = 113
Score = 33.5 bits (73), Expect = 0.031
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 300 CEKCARPVYAMERIKAERRVWHKDCFRCVQCNKQLTVETYQSDHTTLYCKPHFKHLFEPK 479
C +C + + + +H C C C LTVE Y+S T++CK + H F PK
Sbjct: 46 CFQCHDELNTHPFLPWRKAKFHIPCVICGACKNSLTVEEYRS---TVHCK-YCNHPFNPK 101
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 33.1 bits (72), Expect = 0.041
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +1
Query: 181 KKKSKSTRRHKDEGSISVSKSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGES 360
++K KS R E SKS K+T S P+ ++ SA + SG S
Sbjct: 32 RRKGKSALRSALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKSGHS 91
Query: 361 GTRTASDAYSA----TNNSQWRLTRATTRPCTASLTSSICSN 474
++ S+ S+ T +WR +++++ C++ + SN
Sbjct: 92 SSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSSPFLPTSSSN 133
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 32.7 bits (71), Expect = 0.054
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 222 SFIFMPSSGFRLLLYLALFGDHLLIAVLDPRLGLYEVLGLHRRFGRPSAIVFFWFISD-- 49
++I P + R L+ LAL +I L +L L VLGL + S + FF IS
Sbjct: 605 TYISTPDNSLRTLIVLALMALSSIILPLILQLHLRRVLGLSLKLYHLSILYFFELISSIF 664
Query: 48 ---HHIKINIVFKNYTYVH 1
HH+ N Y H
Sbjct: 665 WIAHHVFANDALLEKQYHH 683
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 31.9 bits (69), Expect = 0.095
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 91 KATMESQNLIQTESRVQHSYQEVVTEQRQI---KKKSKSTRRHKDEGSISVSKS-SEKIT 258
K+T+ + T +++Q ++ +Q+ ++ S R ++S+S S ++
Sbjct: 647 KSTLGAPPAAHTSAQMQRMSNSFASQTKQVFGEQRTENSARESLRHSRSNMSRSPSPMLS 706
Query: 259 RKSRPPRTG-NRTRSARS-------APVPSTPWRGSRLSGESGTRTASDAYSATNNSQWR 414
R+S R R+ S+ S +P PST RG +SG+ ++ Y N SQ +
Sbjct: 707 RRSSTLRPSFERSASSLSVRQSDVVSPAPSTRARGQSVSGQQRPSSSMSLYGEYNKSQPQ 766
Query: 415 LT 420
L+
Sbjct: 767 LS 768
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 30.7 bits (66), Expect = 0.22
Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Frame = +1
Query: 40 YVVIRNKPEKNNGARTAKATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRRHKDE 219
YV+ +N K+N R+A T + ++ +R + E + R+ KS+ +++D
Sbjct: 1526 YVLNKNSKNKSNKGRSASYTFSDPSSLEDSNRQKPFNGE---KFRRFSSKSRRGSQNRDS 1582
Query: 220 GSISVSKSSEKITRKSRPPRTGNRTRSARSAPVPST----PWRGSRLSGESGT-RTASDA 384
++ + I P+ S +S + + P + S+++ + T + A
Sbjct: 1583 KKTGKARKDKGINNNQTSPQNKPSKESLKSDTISNEKKVFPQKASKVNLLTPTISNGTRA 1642
Query: 385 YSATNNSQWRLTRATTRPCTASLTSSICSNPNLSKMTTRLMRTEETPNDNLRE 543
N + R A + I +N L++ T+ + R E ++L+E
Sbjct: 1643 SKHANEKENTFPRGVENNLVAPM---IPNNTELNEDTSAVSRNLENATNDLKE 1692
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 29.9 bits (64), Expect = 0.38
Identities = 12/44 (27%), Positives = 27/44 (61%)
Frame = +1
Query: 46 VIRNKPEKNNGARTAKATMESQNLIQTESRVQHSYQEVVTEQRQ 177
++R+ E ++G +AK+ ++QNL + R+ SY+ +T ++
Sbjct: 369 LMRDIKESSSGLTSAKSLGDAQNLCENAVRLYSSYKHYITSMKK 412
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.67
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Frame = +1
Query: 223 SISVSKSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGTR-TASDAYSATN 399
S+S + S+ + S P + N T + ++ P T + + S T T+ ++ SAT+
Sbjct: 326 SVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATS 385
Query: 400 NSQWRLTRA---------TTRPC--TASL--TSSICSNPNLSKMTTRLMRTEETPNDNLR 540
S LT A +T P T+S+ TSS+ S P S +T TP ++
Sbjct: 386 ASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVN 445
Query: 541 EQPGRTAA 564
+A+
Sbjct: 446 STTATSAS 453
Score = 27.5 bits (58), Expect = 2.0
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Frame = +1
Query: 235 SKSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRG-SRLSGESGTRTASDAYSATNNSQW 411
S +S T S P T + +A SA STP + S S + T + ++T ++
Sbjct: 459 SVNSTTATSASSTPLTSVNSTTATSAS--STPLTSVNSTSATSASSTPLTSANSTTSTSV 516
Query: 412 RLTRATTRPCTASLTSSICSNPNLSKMTTRLMRTEETPNDNLREQPGRTAA 564
T + + TSS+ S P S +T TP ++ +A+
Sbjct: 517 SSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSAS 567
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/102 (20%), Positives = 42/102 (41%)
Frame = +1
Query: 241 SSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGTRTASDAYSATNNSQWRLT 420
++ + + + TG T A + S+ S ++ E S S+TNN WR
Sbjct: 53 NTSRANAQKKTESTGKITSEADTEKYNSSK---SPVNKEGSVEKKSSEKSSTNNKPWRGD 109
Query: 421 RATTRPCTASLTSSICSNPNLSKMTTRLMRTEETPNDNLREQ 546
T++P S S + ++++ + P +N+ E+
Sbjct: 110 N-TSKPSANSSAERTSSQHQKPETSSQIGKDNAAPVENVNEK 150
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 376 SDAYSATNNSQWRLTRATTRPCTASLTSSICSNPNLS 486
++AYSAT+NSQ + + +S++ NP+LS
Sbjct: 666 TNAYSATSNSQLSSIFSNLSSSISDASSNVLQNPSLS 702
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 220 GSISVSKSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGTRTAS 378
G IS+++ + +S +GN A AP S WR + S R AS
Sbjct: 209 GVISITQDVSSVPLQSSVFSSGNHAYHASMAPKRSGSWRHTNFHSTSHPRAAS 261
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 127 ESRVQHSYQEVVTEQRQIKKKSKSTRRHKDEGSISVSKSSEKITRKSR 270
E RV +Y+E V +QRQ K + +K + + K EK ++ +
Sbjct: 553 EQRVLQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDK 600
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 605 EELASLDVKSRFEVFERAAKGSEEPP 682
+ SLD+ ++FE+F+R AK E P
Sbjct: 524 DSFESLDMGAKFEIFDRDAKSIEFAP 549
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 46 VIRNKPEKNNGARTAKATMESQNLIQTESRVQHSY--QEVVTEQRQIKKKSKSTRRHKDE 219
V ++K +KN + S N + + + +EVV +++ KKSK + + E
Sbjct: 31 VTKSKAKKNKKKLNKASAFNSDNDSNYDLKPEDDEVDEEVVPVKKKPSKKSKKAKANAFE 90
Query: 220 GSISVSKSSEKITRKSRPPRTGNRTRSARSAP 315
E+ S P N+ S +++P
Sbjct: 91 AFADEQSVEEEEEEDSEKPVRKNKKSSKKASP 122
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 435 TLYCKPHFKHLFEPKPVEDDDEIDAHRRNTK 527
T K ++ F PK EDDDE D RR K
Sbjct: 759 TFPIKDYYIEDFAPKLNEDDDEEDVPRRKKK 789
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.6 bits (56), Expect = 3.6
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 85 TAKATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRRHKDEGSISVSKSSEKITRK 264
T +A+ + ++ + ES +Q S QEV+ + +IKK +DE +S SS++
Sbjct: 250 TVQASQKHSHIAEMESSLQTSKQEVLILKEKIKK-------IEDERMRQMSVSSDRTLDS 302
Query: 265 SRPPRTGNRTRSARSAPVPST 327
N TR + S + +T
Sbjct: 303 QLQTVNENITRISTSIELKNT 323
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 175 QIKKKSKSTRRHKDEGSISVSKSSEKITRK 264
Q K+KS S+ +HK +V+K+S K RK
Sbjct: 425 QYKRKSTSSSKHKLNTENTVTKTSNKKRRK 454
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.6
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Frame = +1
Query: 70 NNGARTAKATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRRHKDEGSISVSK--S 243
+N + +A +E + + + S + + Q ++ SKS R KD+ VS +
Sbjct: 262 DNASASAITVLERTHPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFVVSNTAN 321
Query: 244 SEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGTRTASDAYSATNNSQWRLTR 423
S++ S+P + A S + P + + GE + D Y + +
Sbjct: 322 SDEPASSSKPAKPLTDLNRAFSQRLNLDPQKPGKSQGEI-SEQEEDEYDDAESDEMHSPY 380
Query: 424 ATTRP 438
+T P
Sbjct: 381 STHEP 385
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 76 GARTAKATMESQNLIQTESRV---QHSYQEVVTEQRQIKKKSKSTRRHKDEGSISVSKSS 246
G T++ + Q + E RV S E E+R+ K +++ GS K
Sbjct: 133 GTFTSEFSEWMQKAEEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKL 192
Query: 247 EKITRKSR 270
EKIT+K +
Sbjct: 193 EKITKKKK 200
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 64 EKNNGARTAKATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRR 207
E +N KA + QN++ +SR+ + + V RQ ++ +R
Sbjct: 291 EFDNKESVEKAYFKMQNVLIDDSRIHVDFSQSVARYRQYYNSNRDRKR 338
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 612 WLPWT*SPGSKCSSEPPRAARSLRPSSTG 698
W+P GS SSEPP + STG
Sbjct: 14 WIPQPQEQGSDNSSEPPTTSNVNNTQSTG 42
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 6.2
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 229 SVSKSSEKITRKSRPPRTGNRTRSARSAP--VPSTPWRGSRLSGESGTRTASDAYSATNN 402
SV SS + T S TG+++ S+P V ST S S T ++ + S+ +
Sbjct: 640 SVGPSSSQTTPTSSSSITGSQSLKETSSPAYVSSTVSYTSSSVDSSSTYNSTGSSSSDSQ 699
Query: 403 SQWRLTRATTRPCTASLTSSICSNP 477
S T + S SSI S+P
Sbjct: 700 SFSGTTYSDPTTTITSEVSSILSSP 724
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 8.2
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = +1
Query: 196 STRRHKDEG-SISVSKSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGTRT 372
S R +D G S + S+ + +SR +G S + PVPS G+RL+
Sbjct: 503 SFERERDSGRGRSTNLFSKFKSGRSRSKASGEAPYSYPAPPVPSVNNAGARLTLRDSGAA 562
Query: 373 ASDAYSATNNSQWRLTRATTRPCTASLTSSICSNP 477
YS S + + T S+ + P
Sbjct: 563 PEATYSLRQPSNHAYSEGRSYTFTGGQPPSVPTMP 597
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 134 LDSVCMRFWDSIVALAVLAPLFFSGLFLITT*K*ILFLRTTH 9
+ SVC+ FW LA LA +F ++ +FLR H
Sbjct: 279 VSSVCIPFWTFERTLAKLAKVFLLQSGIVLVLNGTMFLRGKH 320
>SPBC2F12.08c |ceg1|pce1|mRNA guanylyltransferase
Ceg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 10 CVVLKNNIYFYVVIRNKPEKNNGARTAKATMES-QNLIQTESRVQHSYQEVVTEQRQIKK 186
C + N + ++ R+ N T K+ ++S ++ + E ++ ++ E +K
Sbjct: 314 CYLDDENRWRFLRFRDDKRDANHISTVKSVLQSIEDGVSKEDLLKE--MPIIREAYYNRK 371
Query: 187 KSKSTRRHKDEGSISVSKSSEKITRKS 267
K T+R DE S + + +K+ ++S
Sbjct: 372 KPSVTKRKLDETSNDDAPAIKKVAKES 398
>SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|chr
3|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 134 LDSVCMRFWDSIVALAVLAPLFFSGLFLITT*K*ILFLRTTH 9
+ SVC+ FW LA LA +F ++ +FLR H
Sbjct: 246 VSSVCIPFWTFERTLAKLAKVFLLQSGIVLVLNGTMFLRGKH 287
>SPCC576.14 |||diphthine synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 283
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 596 LGLEELASLDVKSRFEVFERAAKGSE--EPP 682
LGL L LD+K + + +E A+G + EPP
Sbjct: 155 LGLHTLVLLDIKVKEQSWENLARGRKVYEPP 185
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 8.2
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Frame = +1
Query: 151 QEVVTEQRQIKKKSKSTRRHKD------EGSISVSKSSEKITRKSRPPRTGNRTRSARSA 312
QE T ++ +K S++ D +G ++ ++ + S P+T + RS
Sbjct: 558 QENKTTNEKVYRKPLSSQNTFDTLPTISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVT 617
Query: 313 PVPSTPWRGSRLSGESGTRTAS 378
P STP S L+ S +S
Sbjct: 618 PSSSTPTPASVLAPPSSASLSS 639
>SPAC18B11.08c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 95
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 308 LLALRVRFPVRGGLDFLVIFSELLDTEIDPSS 213
+ AL +RF + + F++ FS LL+ PSS
Sbjct: 36 MAALFLRFKLIAWVAFILTFSNLLNANTSPSS 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.121 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,042,602
Number of Sequences: 5004
Number of extensions: 63140
Number of successful extensions: 187
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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