Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0179.Seq
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    33   0.009
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    27   0.58 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.4  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    25   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.1  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   9.5  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +1

Query: 37  FYVVIRNKPEK-NNGARTAKATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRRHK 213
           F  V+R KP   N+G  +++   + Q  +Q + + Q   Q+   EQ+Q +++ +  RR K
Sbjct: 164 FVEVVRRKPRGINSGKSSSQQREQQQRSLQQQQQQQQQQQQQQQEQQQQQQQQRKIRRPK 223


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 18/94 (19%), Positives = 37/94 (39%)
 Frame = +1

Query: 271 PPRTGNRTRSARSAPVPSTPWRGSRLSGESGTRTASDAYSATNNSQWRLTRATTRPCTAS 450
           PP + N +   +S   P  PW  S+   + G +T +   +     ++   R  TR     
Sbjct: 220 PPNSQNASSGLQS---PLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 276

Query: 451 LTSSICSNPNLSKMTTRLMRTEETPNDNLREQPG 552
           +  ++C      K+  +  R +    +  + +PG
Sbjct: 277 IAHALCLTERQIKIWFQNRRMKWKKENKTKGEPG 310


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = +1

Query: 61   PEKNNGARTAK-ATMESQNLIQTESRVQHSYQEVVTEQRQIKKKSKSTRRHKDEGSISVS 237
            P   NG  T + + ++ Q + Q    +QH YQ+ + +Q+Q  ++ +  ++H+      + 
Sbjct: 1274 PNTPNGMPTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQ--QQQQQQQQHQQHQQHQLQ 1331

Query: 238  KSSEKITRKSRPPRTGNRTRSARSAPVPSTPWRGSRLSGESGT 366
               +    +S      + + S+   P PS       LS  SG+
Sbjct: 1332 HHHQPQLSQS-----SHHSSSSHGGPTPSIISHTPSLSSASGS 1369


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 22  KNNIYFYVVIRNKPEKNNGARTAKATMESQNLIQTESRV 138
           K+N     + R +PEK+NG+   K   + +  +++ S V
Sbjct: 15  KSNFTKSAINRKRPEKSNGSTVKKTIRKRRPALRSTSGV 53


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
 Frame = +3

Query: 333  ERIKAERRVWHKDCFRCVQCNKQLTVETYQSDHTTLYCKPHFKHLF----EPKPVEDDDE 500
            E IK +  +   +C  C+ C++  +  T  S   T +    F+H F    + K  ++D +
Sbjct: 2998 ETIKNKNSLMRFEC--CIDCSQDASSITSNSYKVTNWINEIFEHFFNTANQGKQDQEDRK 3055

Query: 501  IDA----HRRNTK 527
            ++     H+R TK
Sbjct: 3056 VNPYLKHHKRQTK 3068


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 626 RPGKPAPPALGPVCRTL 576
           R G+P  P   PVCR +
Sbjct: 150 RYGRPLEPVASPVCRMM 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.121    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,368
Number of Sequences: 2352
Number of extensions: 16781
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)