Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0178.Seq
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 109 4e-25
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 100 4e-22
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 86 6e-18
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 76 5e-15
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 64 2e-11
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 62 1e-10
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 61 1e-10
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 59 6e-10
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 55 1e-08
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 42 7e-05
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 38 0.001
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 38 0.001
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.006
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 35 0.010
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 33 0.032
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 32 0.073
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 31 0.22
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 29 0.52
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 29 0.52
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 29 0.52
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 29 0.68
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 29 0.90
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 28 1.2
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 28 1.6
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 27 2.1
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 27 2.8
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 2.8
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 27 2.8
SPBC15D4.05 |||conserved protein|Schizosaccharomyces pombe|chr 2... 27 3.6
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 26 6.4
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 26 6.4
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 6.4
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 6.4
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 25 8.4
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 109 bits (262), Expect = 4e-25
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = +1
Query: 511 YNIQYGRLNAPAADIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTI 690
YNI+Y + +A +I +AAK A IHDRIL FPD Y+++VGERGL+LSGGEKQR+A+AR I
Sbjct: 676 YNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAI 735
Query: 691 LKDPAIVLLDEATS 732
LKDP+I+LLDEATS
Sbjct: 736 LKDPSIILLDEATS 749
Score = 107 bits (258), Expect = 1e-24
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +2
Query: 257 FGYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRT 436
F Y + VL++I+F PG +ALVG G GKSTIMR+L RF+DVN G++ +D+QD+R
Sbjct: 591 FAYDPRKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRN 650
Query: 437 VTQTSLRANIGVVPQDTVLFNNTV 508
VT +SLR++IGVVPQD+ LFN+T+
Sbjct: 651 VTLSSLRSSIGVVPQDSTLFNDTI 674
Score = 67.7 bits (158), Expect = 2e-12
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +3
Query: 45 TVGDYALFASYIVQLYVPLNWFGTYYRAIQKNFVDMENMFDLLRVDTDVRDAAGAPELVV 224
TVGD+ + +Y++QL PLN+FGT YR++Q + +D E + ++ V + AP+L V
Sbjct: 520 TVGDFVILLTYMIQLQQPLNFFGTLYRSLQNSIIDTERLLEIFEEKPTVVEKPNAPDLKV 579
Query: 225 RRGGVEFKHVPSDTAPR 275
+G V F HV PR
Sbjct: 580 TQGKVIFSHVSFAYDPR 596
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 99.5 bits (237), Expect = 4e-22
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +2
Query: 257 FGYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRT 436
F Y R +LN SF I G+ VA VG G GKSTI+RLLFRFYD + G +L+D Q +
Sbjct: 450 FSYNPNRPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQ 509
Query: 437 VTQTSLRANIGVVPQDTVLFNNTV 508
+T SLR IGVVPQDT LFN+T+
Sbjct: 510 ITLNSLRKAIGVVPQDTPLFNDTI 533
Score = 93.5 bits (222), Expect = 3e-20
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +1
Query: 511 YNIQYGRLNAPAADIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTI 690
YNI YG A +I+ AAK A IHD I +FP+ Y T+VGERGL +SGGEKQR+A++R +
Sbjct: 535 YNIGYGNPKASNDEIVEAAKKAKIHDIIESFPEGYQTKVGERGLMISGGEKQRLAVSRLL 594
Query: 691 LKDPAIVLLDEATS 732
LK+P I+ DEATS
Sbjct: 595 LKNPEILFFDEATS 608
Score = 69.7 bits (163), Expect = 4e-13
Identities = 34/106 (32%), Positives = 57/106 (53%)
Frame = +3
Query: 27 VKTAEFTVGDYALFASYIVQLYVPLNWFGTYYRAIQKNFVDMENMFDLLRVDTDVRDAAG 206
+ T+ TVGD + + QL +PLN+ G+ YR +++ F DME +F L R++ V++A
Sbjct: 373 IVTSNLTVGDLVMINQLVFQLSIPLNFLGSVYREMRQAFTDMEQLFSLKRINIQVKEAPD 432
Query: 207 APELVVRRGGVEFKHVPSDTAPRGSSLTTSVLKSPPEAPLHWSGPS 344
A +LV++ G ++F +V P L P A + + G S
Sbjct: 433 ARDLVLKGGSIQFDNVHFSYNPNRPILNGCSFNIPAGAKVAFVGAS 478
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 85.8 bits (203), Expect = 6e-18
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +1
Query: 514 NIQYGRLNAPAADIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTIL 693
NI YG+ NA +I AAK A+ +L+FP+ + TQVG RGL+LSGG+KQRIAIAR +L
Sbjct: 577 NIAYGKSNASQEEIEDAAKRANC-SFVLSFPEKWSTQVGTRGLQLSGGQKQRIAIARALL 635
Query: 694 KDPAIVLLDEATS 732
++PA ++LDEATS
Sbjct: 636 RNPAFLILDEATS 648
Score = 74.1 bits (174), Expect = 2e-14
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +2
Query: 281 VLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRA 460
+ +N+SF I PG+ VA+V P G GKSTI +LL RFY + G +L D D+ T R+
Sbjct: 499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILADGVDISTYNVHQWRS 558
Query: 461 NIGVVPQDTVLFNNTV 508
+ G+V Q+ VLF+ T+
Sbjct: 559 HFGLVGQEPVLFSGTI 574
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 76.2 bits (179), Expect = 5e-15
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +1
Query: 553 IISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
+ AAK A+ +D I+T P+ + T VG+RG +SGG+KQRIAIAR ++ DP I+LLDEATS
Sbjct: 537 VYDAAKLANAYDFIMTLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATS 596
Score = 75.4 bits (177), Expect = 8e-15
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +1
Query: 550 DIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEAT 729
++I A K A+IH+ IL P+ Y+T G++G LSGG+KQRIAIAR ++++P I+LLDEAT
Sbjct: 1227 EMIEACKKANIHEFILGLPNGYNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEAT 1286
Query: 730 S 732
S
Sbjct: 1287 S 1287
Score = 70.9 bits (166), Expect = 2e-13
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = +2
Query: 272 ERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTS 451
E LVL+N S G ALVG G+GKSTI+ L+ RFYD G V +D +D+RT+ S
Sbjct: 434 EVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLRTLNVAS 493
Query: 452 LRANIGVVPQDTVLFNNTV 508
LR I +V Q+ VLF TV
Sbjct: 494 LRNQISLVQQEPVLFATTV 512
Score = 65.7 bits (153), Expect = 6e-12
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 FGYGSER--LVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDV 430
F Y + R VL ++ + PG VA VG G GKST + L+ RFYD + GAVLVD +V
Sbjct: 1126 FSYPTRRHIKVLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNV 1185
Query: 431 RTVTQTSLRANIGVVPQDTVLFNNTV 508
R R I +V Q+ L+ TV
Sbjct: 1186 RDYNINDYRKQIALVSQEPTLYQGTV 1211
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 64.1 bits (149), Expect = 2e-11
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 284 LNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRAN 463
LNNI+ +I+P + +VG GAGKST+ LFR + EG + +D +D+ LR+
Sbjct: 1243 LNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLRSR 1302
Query: 464 IGVVPQDTVLFNNTV 508
+ ++PQ++ +F +
Sbjct: 1303 LSIIPQESQIFEGNI 1317
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 601 FPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
F + T+VG++G LSGG+K RI++AR I I LLD+ S
Sbjct: 689 FTEGDQTEVGQKGASLSGGQKSRISLARAIYSQADIYLLDDVLS 732
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 574 ADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
A + + I D ++V E G S G++Q I +AR +L I+LLDEAT+
Sbjct: 1339 ASLKNCISQLEDGLYSRVAEGGANFSSGQRQLICLARVLLTSTRILLLDEATA 1391
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 284 LNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAV 409
L I+F G + G +GAGKS+++ N G+V
Sbjct: 597 LRQINFVAKNGELTCIFGKVGAGKSSLLEACMGNMYKNSGSV 638
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +2
Query: 281 VLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRA 460
VL +I+ +I P +A+VG G+GKST+ L RF + GAV VD D+ ++ LR
Sbjct: 1196 VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDINSLDLEVLRQ 1255
Query: 461 NIGVVPQDTVLFNNTV 508
I ++PQD VL + TV
Sbjct: 1256 RISLIPQDPVLISGTV 1271
Score = 33.5 bits (73), Expect = 0.032
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 619 TQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
T + G LSGG+KQR+++AR + + + + D+ S
Sbjct: 698 TYIHSNGSSLSGGQKQRVSLARALYSNAEVYIFDDIFS 735
Score = 29.1 bits (62), Expect = 0.68
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = +2
Query: 284 LNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRAN 463
L N++F I +VG G+GKST+ L V G +T S+
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLGELHVISG----------KMTTPSISQR 646
Query: 464 IGVVPQDTVLFNNTV 508
I VPQ L N T+
Sbjct: 647 IAYVPQAAWLRNGTI 661
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 278 LVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLR 457
LVLN+IS I P + +VG GAGKST+ LFR + G + +D+ ++ ++ LR
Sbjct: 1239 LVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLR 1298
Query: 458 ANIGVVPQDTVLFNNTV 508
+ + ++PQ+ F T+
Sbjct: 1299 SRLAIIPQENQAFEGTI 1315
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 607 DAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
D T+VGE+G+ LSGG+K RI++AR + I LLD+ S
Sbjct: 693 DGDQTEVGEKGISLSGGQKARISLARAVYSRSDIYLLDDILS 734
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 535 NAPAADIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVL 714
NA +I A + A + I T ++V E G LS G++Q + + R +L ++L
Sbjct: 1324 NATDEEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLL 1383
Query: 715 LDEATS 732
LDEAT+
Sbjct: 1384 LDEATA 1389
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 260 GYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAV 409
G + L +I F G +VG +G GKS+++ + G+V
Sbjct: 591 GQNAAEPTLRDIDFVARRGELCCIVGKVGMGKSSLLEACLGNMQKHSGSV 640
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 59.3 bits (137), Expect = 6e-10
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 281 VLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRA 460
+L +++ I P VA+VG G+GKST+ L RF G + ++ ++ ++V +LR
Sbjct: 1228 ILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVNLNALRQ 1287
Query: 461 NIGVVPQDTVLFNNTVDTTFNTED 532
I +PQD +LF+ TV + + D
Sbjct: 1288 RISFIPQDPILFSGTVRSNLDPFD 1311
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +1
Query: 619 TQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
T++GE+G+ LSGG+KQRIA+AR + +IVL+D+ S
Sbjct: 731 TEIGEKGVTLSGGQKQRIALARAVYSPTSIVLMDDVFS 768
Score = 38.7 bits (86), Expect = 8e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 616 DTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
DT V G S G+KQ +A+AR I++ I++LDE T+
Sbjct: 1346 DTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTA 1384
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 LVGPIGAGKSTIMRLLFRFYDVNEGAV-LVDEQDVRTVTQTSLRANIGVVPQDTVLFN 499
++GP G+GKS+++ L +N+G+ L + V V+Q N + +D +LF+
Sbjct: 646 VIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQVPWLRNATI--RDNILFD 701
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 54.8 bits (126), Expect = 1e-08
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 514 NIQYGRLNAPAADIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTIL 693
NI NA +D + A + + LTF +YDT E L SGG++QRIA+AR +L
Sbjct: 529 NIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASL--SGGQQQRIALARALL 586
Query: 694 KDPAIVLLDEATS 732
+D I++LDE TS
Sbjct: 587 RDTEILILDEPTS 599
Score = 50.4 bits (115), Expect = 3e-07
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = +2
Query: 284 LNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRAN 463
L N+S I G V ++GP G+GKST + LL R++ G + +D+ + + + L +
Sbjct: 452 LINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGST 511
Query: 464 IGVVPQDTVLFNNTV 508
I +V Q V+F+ T+
Sbjct: 512 ITLVCQQPVIFDMTI 526
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +1
Query: 553 IISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
++ A + + I P+ DT + E SGG+ QR+A AR +L++P +++LDE TS
Sbjct: 1205 VMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFARALLRNPRLLILDECTS 1264
Score = 44.0 bits (99), Expect = 2e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 FGY-GSER--LVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQD 427
F Y SER L LNN+S I VA+VG G+GKST++ LL + Y + + +D
Sbjct: 1106 FAYPDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYPSED--IYIDGYP 1163
Query: 428 VRTVTQTSLRANIGVVPQDTVLFNNTV 508
+ + L + +V Q L +T+
Sbjct: 1164 LTNIDTNWLLKKVAIVDQKPHLLGSTI 1190
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 42.3 bits (95), Expect = 7e-05
Identities = 17/37 (45%), Positives = 30/37 (81%)
Frame = +2
Query: 266 GSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
G+ + LN+ISF+++ S +A++GP GAGKST++++L
Sbjct: 684 GTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVL 720
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 550 DIISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEAT 729
+I+ A K D ++ P +G LSGG K ++A+ R + K+P I+LLDE T
Sbjct: 527 EIVKALKENSFTDELINMP------IGS----LSGGWKMKLALTRAMFKNPDILLLDEPT 576
Query: 730 S 732
+
Sbjct: 577 N 577
Score = 33.5 bits (73), Expect = 0.032
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 263 YGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
YG+ +++LN ++ G L GP G+GKST+MR +
Sbjct: 444 YGA-KILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAI 480
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 646 LSGGEKQRIAIARTILKDPAIVLLDEATS 732
LSGG+K ++ +A P +++LDE T+
Sbjct: 904 LSGGQKVKLVLAACTWLRPHVIVLDEPTN 932
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 257 FGYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVL 412
F Y + + ++F + S VALVGP GAGK+T+++L+ + G+V+
Sbjct: 601 FNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSVV 652
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 616 DTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
D + +R LSGG + RIA+AR + P +++LDE T+
Sbjct: 411 DEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTN 449
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +2
Query: 275 RLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
+L++ + + G L+ P G+GKST++ +
Sbjct: 288 KLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAI 321
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 37.9 bits (84), Expect = 0.001
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 GSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYD--VNEGAVLVDEQDVRTV 439
G R +LN + + PG AL+G GAGK+T++ +L + D V G +LV+ R +
Sbjct: 895 GEHRRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNG---RGL 951
Query: 440 TQTSLRANIGVVPQDTVLFNNTV 508
T R V QD + +TV
Sbjct: 952 DSTFQRRTGYVQQQDVHIGESTV 974
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 284 LNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAV 409
L+N++ ++ S VA++GP GAGKST++++L EG V
Sbjct: 709 LDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEVIPQEGKV 750
Score = 31.1 bits (67), Expect = 0.17
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 646 LSGGEKQRIAIARTILKDPAIVLLDEATS 732
LSGG K ++ +AR +L+ I+LLDE T+
Sbjct: 563 LSGGWKMKLELARAMLQKADILLLDEPTN 591
Score = 31.1 bits (67), Expect = 0.17
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 646 LSGGEKQRIAIARTILKDPAIVLLDEATS 732
LSGG+K ++ IA + +P +++LDE T+
Sbjct: 911 LSGGQKVKVVIAACLWNNPQLLVLDEPTN 939
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 263 YGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
YG RL+L++ + + G +VG G GKST++R +
Sbjct: 454 YGG-RLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI 490
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 35.1 bits (77), Expect = 0.010
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 257 FGYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAV 409
F Y +L ++ + S + +VGP GAGKST+++LL G V
Sbjct: 525 FEYVPGHPILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGIV 575
Score = 34.3 bits (75), Expect = 0.018
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 631 ERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
++ + LSGG+K R+A A L++P I++LDE T+
Sbjct: 632 QKMITLSGGQKSRVAFACLGLQNPHILILDEPTN 665
Score = 28.7 bits (61), Expect = 0.90
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 649 SGGEKQRIAIARTILKDPAIVLLDEATS 732
SGG + R+++AR + P ++LLDE ++
Sbjct: 356 SGGWRMRLSLARALFCQPDLLLLDEPSN 383
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 33.5 bits (73), Expect = 0.032
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 278 LVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
L L++++ + GS LVG GAGKST+++LL
Sbjct: 18 LSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLL 50
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 646 LSGGEKQRIAIARTILKDPAIVLLDEAT 729
+S GE++R+ + +L+ ++LLDE T
Sbjct: 129 VSDGERRRVQLCMGLLRPFEVLLLDEVT 156
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 32.3 bits (70), Expect = 0.073
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 646 LSGGEKQRIAIARTILKDPAIVLLDEATS 732
+SGG + R+A++R + P+++LLDE T+
Sbjct: 221 MSGGWRMRVALSRALFIKPSLLLLDEPTN 249
Score = 30.7 bits (66), Expect = 0.22
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 272 ERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
+ + ++SF I S VA+VG G GKST++ L+
Sbjct: 402 DHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLI 436
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 275 RLVLNNISFKIAPGSTVALVGPIGAGKSTIM 367
RL++ N + ++ G L+G G+GKST +
Sbjct: 88 RLLIENATIELNHGQRYGLLGDNGSGKSTFL 118
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 604 PDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
P + D + + L LSGGE QR+AI + + L+DE ++
Sbjct: 442 PLSIDNIIDQEVLNLSGGELQRVAICLALGMPADVYLIDEPSA 484
Score = 30.3 bits (65), Expect = 0.30
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 553 IISAAKNADIHDRILTFPDAYDTQVGERGLRLSGGEKQRIAIARTILKDPAIVLLDEATS 732
+I A N + + ++ D + E G LSGGE QR AIA + + + DE +S
Sbjct: 190 LIKARANNNNFEEVMDHTDLQNLLNREVG-HLSGGELQRFAIAAVATQKADVYMFDEPSS 248
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 311 PGSTVALVGPIGAGKSTIMRLL 376
PG + LVG G GKST +++L
Sbjct: 102 PGQVLGLVGTNGIGKSTALKIL 123
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 29.5 bits (63), Expect = 0.52
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 323 VALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRANIGVVPQDTVLFNN 502
V ++G G+GKST++ L +DV TQ SL + GV P+ TV+ N+
Sbjct: 98 VLVLGESGSGKSTLVNTLL-------------NRDVYPPTQKSLTGDFGVNPEPTVMINS 144
Query: 503 T 505
+
Sbjct: 145 S 145
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 311 PGSTVALVGPIGAGKSTIMRLLFRFY 388
P VA++GP G GKST+++ L R Y
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRY 98
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 57 YALFASY-IVQLYVPLNWFGTYYRAIQKNFVDMEN 158
YAL + Y I+ L +P+ W T+Y F DMEN
Sbjct: 74 YALLSFYVIILLAIPVWWKTTHYERSSLPFEDMEN 108
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 29.1 bits (62), Expect = 0.68
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 323 VALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRTVTQTSLRANIGVVPQDTVLFNN 502
V +VGP G+GKST++ LF + ++ L + R T+ + + + V L N
Sbjct: 35 VMVVGPSGSGKSTLINTLFSAHLMDSKGRLDYQAPYRQTTEIHVTSQV-VRENRVQLQLN 93
Query: 503 TVDT 514
+DT
Sbjct: 94 LIDT 97
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 28.7 bits (61), Expect = 0.90
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 281 VLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
+ N+SF++A A++G G+G++T +R +
Sbjct: 19 LFKNVSFELARKQNWAIIGNTGSGRTTFLRCI 50
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 269 SERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL 376
S++ +L N+S + + AL+G +GKS ++R+L
Sbjct: 772 SKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRIL 807
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 305 IAPGSTVALVGPIGAGKSTIMRLLFRFYDVNE 400
+ PGS++ ++G G+G ST+++ L + NE
Sbjct: 99 LQPGSSLLVLGHEGSGGSTLLKALCGIVEENE 130
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +2
Query: 266 GSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLL-----FRFYDVNE 400
G+ + + + I+ +++ L+G GAGK+TI +++ F+F D++E
Sbjct: 847 GATSVASDPLKGSISKNASIILIGMRGAGKTTIGKIIAKQLNFKFLDLDE 896
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 613 YDTQVGERGLRLSGGEKQRIAIARTILK 696
Y+T + GL +SGGE+++ A+ I++
Sbjct: 332 YNTCIANIGLTVSGGEREQAAVREDIIR 359
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 299 FKIAPGSTVALVGPIGAGKSTIMR 370
F I P V L GP G GK+ +MR
Sbjct: 308 FNIMPPRGVLLYGPPGTGKTMVMR 331
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 314 GSTVALVGPIGAGKSTIMRLL 376
G VA++GP AGKS+++ LL
Sbjct: 239 GINVAILGPSNAGKSSLINLL 259
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 374 LFRFYDVNEGAVLVDEQDVRTVTQTSLRANIGVVPQDTVLFNNTV 508
L R+Y+ E L + + T TSL +G + + FNN +
Sbjct: 933 LLRYYEDQELYALCQQSRIIGCTWTSLSTRLGTLKEKGFCFNNLI 977
>SPBC15D4.05 |||conserved protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 3.6
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 257 FGYGSERLVLNNISFKIAPGSTVALVGPIGAGKSTIMRLLFRFYDVNEGAVLVDEQDVRT 436
F S+ L++++ S + P L G +GAGK++++R + + AVL++E
Sbjct: 43 FEQQSDFLLVDHDS-TLDPVPVTILTGFLGAGKTSLLRSILENRNGKRVAVLMNEVGDSG 101
Query: 437 VTQTSLRANIG 469
+ SL ++G
Sbjct: 102 DLERSLMEDVG 112
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 57 YALFASYIVQLYVPLNWFGTY 119
Y L +S I+QLY PL W ++
Sbjct: 65 YLLGSSSIIQLYEPLLWLSSF 85
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 324 TVLPGAILKLMLLRTSLS 271
T+LPG +L L+ LRT+LS
Sbjct: 325 TLLPGILLALLSLRTTLS 342
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 305 IAPGSTVALVGPIGAGKSTIM-RLLFR-FYDVNEGAVLV 415
+ G++V +VGP G+GKS ++ +L R ++NE + +V
Sbjct: 572 LGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINEKSYVV 610
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 627 NLRVVSVGKRQYSVVNVRVLGGRY 556
N + S KRQ SV NVRV GG +
Sbjct: 584 NFQFSSALKRQSSVSNVRVSGGSF 607
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 293 ISFKIAPGSTVALVGPIGAGKSTIMRLLFR 382
++ K+ P V + GP G GKST+++ L +
Sbjct: 14 VTLKLKP---VVVFGPSGVGKSTLLKRLLK 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,707,380
Number of Sequences: 5004
Number of extensions: 52337
Number of successful extensions: 295
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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