Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0178.Seq
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    37   6e-04
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    37   6e-04
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    37   6e-04
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    25   1.8  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   2.4  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   5.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.4  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    23   7.4  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   7.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.4  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   9.7  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 616 DTQVGERGL--RLSGGEKQRIAIARTILKDPAIVLLDEATS 732
           DT +G  G    LSGGE++R+A A   L DP ++L DE TS
Sbjct: 232 DTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTS 272


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 616 DTQVGERGL--RLSGGEKQRIAIARTILKDPAIVLLDEATS 732
           DT +G  G    LSGGE++R+A A   L DP ++L DE TS
Sbjct: 232 DTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTS 272


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +1

Query: 616 DTQVGERGL--RLSGGEKQRIAIARTILKDPAIVLLDEATS 732
           DT +G  G    LSGGE++R+A A   L DP ++L DE TS
Sbjct: 210 DTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTS 250


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -3

Query: 346 ADGPDQCNGASGGDFKTDVVKDE----PLGAVSEG-TCLNSTP 233
           A G D C G SGG  +  V ++      LG  S G  C +STP
Sbjct: 319 AGGKDTCQGDSGGPLQVTVQENHCMFYILGVTSLGQVCGSSTP 361


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 322 GASGGDFKT-DVVKDEPLGAVSEGTCLNSTPPRRTTSSGAPAASRTSVST 176
           G++G  F+       E + + S  T + STP   TTSS +  +S +S S+
Sbjct: 512 GSTGERFQDLGPAASESVRSQSNNTTVVSTPSSSTTSSSSTTSSSSSSSS 561


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 188 VRIHPQQVEHVLHVHEILLYSSV 120
           VR   + VEHVLH+ E L + ++
Sbjct: 174 VRNSTEPVEHVLHLEEELYFLNI 196


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 424 LLVHQHG-ALVHVVKTE*QTHYRRFSRADGPDQCNGASGG 308
           +L+ +HG A  H  K   +T +   S AD PD C+  + G
Sbjct: 263 VLLPKHGTARQHSPKIVKKTRHLSTSSADEPDACDRKAPG 302


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 231 GGVEFKHVPSD 263
           GGVE  HVPSD
Sbjct: 93  GGVEMLHVPSD 103


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +3

Query: 378 SVFTT*TRAPCWWTSRTCAPSRRPRCAPTSASCRKTR--CSSTTP 506
           S F    R P W  S + A  R    A   A C +TR  C+ T P
Sbjct: 46  SFFPPPCRVPGWRLSTSGASIRMHASARKRAYCPRTRSACAETFP 90


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 104 IQGNVKLHYVRREQSVVTDSEFSRLHHQRH 15
           +Q   + +      +++TDS   R HHQ +
Sbjct: 205 VQHRAQRNRTNNNNTIITDSGHMRSHHQHY 234


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
 Frame = +1

Query: 112 EHITELYRRISWTWRTCSTC*GWIRTCATRPGRPSWWC-GAAESSSSTC 255
           +  T    RI    R C      +       GRP++WC  A E   + C
Sbjct: 260 DRATHAKSRIESLTRACDETMSRVFPSQDHTGRPAYWCTPAIEELENEC 308


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 241 STPPRRTTSSGAPAASRTSVSTLSRSNMFSM 149
           S+P     + G P ASR +  TL R++   M
Sbjct: 869 SSPSMVRKALGTPTASRKTAGTLPRNDFEEM 899


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,171
Number of Sequences: 2352
Number of extensions: 14911
Number of successful extensions: 60
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)