Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0177.Seq
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.26 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.80 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 172  APPEDPVRAGARRAETLNRNPGGAPPRADQLFDSM 276
            A P    R+G  R+   +R PGG+      +FDS+
Sbjct: 935  ASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSL 969



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 245  RPARTSCSTACAGCWARSCSRRGYCPRTSTG 337
            +PA T   + C    + + S R   PR++ G
Sbjct: 921  QPAETHAGSPCRNSASPASSDRSGTPRSTNG 951


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 382 SHHLGLDVHDAPLVRRATPVLTNMIVTVEPGIYIRTD 492
           SH   L   D P+VRRA       +  V    Y++TD
Sbjct: 170 SHFRALCQDDTPMVRRAAATKLGELAQVVELEYLKTD 206


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 111 VSVGCTTLTSPARGRSPDSSRATRGSCKSWCSPC 212
           V  G   L       SP ++    G+  SW +PC
Sbjct: 150 VGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPC 183


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 599  LLGAGVGEHERVPVRDED--VVFYTDTQAAELPGTRVSSVRM*IPGSTVTIMLV 444
            L  AG G+ E +P  DE+   V   + +  E P +  SS  +  P  + T  LV
Sbjct: 1764 LADAGTGQQETIPPIDEEPPSVEAVEEEREEAPPSVHSSTVVPPPQHSTTQSLV 1817


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 2/24 (8%)
 Frame = +3

Query: 150 GRSPDSSRATRG--SCKSWCSPCR 215
           G S    RA  G      WC PCR
Sbjct: 568 GNSMKKCRARYGLDQQNQWCKPCR 591


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 2/24 (8%)
 Frame = +3

Query: 150 GRSPDSSRATRG--SCKSWCSPCR 215
           G S    RA  G      WC PCR
Sbjct: 460 GNSMKKCRARYGLDQQNQWCKPCR 483


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,223
Number of Sequences: 336
Number of extensions: 2733
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)