Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0177.Seq
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p pro...    96   5e-20
AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA...    96   5e-20
AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p pro...    38   0.010
AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA...    38   0.010
BT001331-1|AAN71086.1|  559|Drosophila melanogaster AT18731p pro...    37   0.031
AE014296-3710|AAN12200.1|  534|Drosophila melanogaster CG32454-P...    37   0.031
BT030128-1|ABN49267.1| 1274|Drosophila melanogaster IP15561p pro...    29   8.2  
AY061475-1|AAL29023.1| 1280|Drosophila melanogaster LD44171p pro...    29   8.2  
AE014296-394|AAF47597.2| 1280|Drosophila melanogaster CG1960-PA,...    29   8.2  
AE014296-393|AAN11507.1| 1259|Drosophila melanogaster CG1960-PB,...    29   8.2  

>AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p
           protein.
          Length = 545

 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +1

Query: 232 PGGAPPRADQLFDSMCRLLGTQLQQEGILPKNIDGH-ELISMAYSLCPHHVSHHLGLDVH 408
           PGG     DQLF++ C  LG  LQ+ G++ K+   + EL+S  Y  CPHHVSH+LG+DVH
Sbjct: 400 PGGET--LDQLFETTCYKLGKYLQEIGLVGKSFSEYKELVSQGYRFCPHHVSHYLGMDVH 457

Query: 409 DAPLVRRATPVLTNMIVTVEPGIYIRTDDTRVP 507
           D P V R T ++  M+ TVEPGIYI  D   VP
Sbjct: 458 DTPHVPRNTRIVPGMVFTVEPGIYIGQDCGDVP 490



 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = +2

Query: 5   SFPDVVAGAARAAHIHYVANNQLLNHGDLLLVDSGCQRWLYNSDISRTWPVSGLFTRHQR 184
           ++P VVA    A  IHYVAN+QLL   DL+L+D+GC+   Y SDI+RTWP SG+FT  QR
Sbjct: 321 AYPPVVAAGKNATVIHYVANSQLLGQQDLVLMDAGCEYGGYTSDITRTWPASGVFTEPQR 380

Query: 185 IL*ELVLAVQKRLI 226
            L +++  +Q+ +I
Sbjct: 381 TLYDMLHQLQEEII 394



 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 510 EFRGLGIRIEDDVLITD-GDPLVLTDSCAKEVQDIEAIVGKQ 632
           EFRG+GIRIEDD+LI + G   VLT++C K+ + ++ +  +Q
Sbjct: 492 EFRGIGIRIEDDLLINENGHVEVLTEACVKDPRALQELCKQQ 533


>AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA
           protein.
          Length = 545

 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +1

Query: 232 PGGAPPRADQLFDSMCRLLGTQLQQEGILPKNIDGH-ELISMAYSLCPHHVSHHLGLDVH 408
           PGG     DQLF++ C  LG  LQ+ G++ K+   + EL+S  Y  CPHHVSH+LG+DVH
Sbjct: 400 PGGET--LDQLFETTCYKLGKYLQEIGLVGKSFSEYKELVSQGYRFCPHHVSHYLGMDVH 457

Query: 409 DAPLVRRATPVLTNMIVTVEPGIYIRTDDTRVP 507
           D P V R T ++  M+ TVEPGIYI  D   VP
Sbjct: 458 DTPHVPRNTRIVPGMVFTVEPGIYIGQDCGDVP 490



 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = +2

Query: 5   SFPDVVAGAARAAHIHYVANNQLLNHGDLLLVDSGCQRWLYNSDISRTWPVSGLFTRHQR 184
           ++P VVA    A  IHYVAN+QLL   DL+L+D+GC+   Y SDI+RTWP SG+FT  QR
Sbjct: 321 AYPPVVAAGKNATVIHYVANSQLLGQQDLVLMDAGCEYGGYTSDITRTWPASGVFTEPQR 380

Query: 185 IL*ELVLAVQKRLI 226
            L +++  +Q+ +I
Sbjct: 381 TLYDMLHQLQEEII 394



 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 510 EFRGLGIRIEDDVLITD-GDPLVLTDSCAKEVQDIEAIVGKQ 632
           EFRG+GIRIEDD+LI + G   VLT++C K+ + ++ +  +Q
Sbjct: 492 EFRGIGIRIEDDLLINENGHVEVLTEACVKDPRALQELCKQQ 533


>AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p
           protein.
          Length = 491

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   SSFPDVVAGAARAAHIHY----VANNQLLNHGDLLLVDSGCQRWLYNSDISRTWPVSGLF 169
           +S+  +      ++ +HY      N++ +  GDL L D G     Y +DI+ T+P +G F
Sbjct: 242 ASYTCICGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGKF 301

Query: 170 TRHQRIL*ELVLAVQKRLIE 229
           T  Q+ +   VL  +  + E
Sbjct: 302 TDDQKFIYNAVLDARNAVTE 321



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 280 RLLGTQLQQEGILPKNIDGHELISMAYSLCPHHVSHHLGLDVHD 411
           R+L  +L++ G+L  +++      ++    PH + H +GLDVHD
Sbjct: 338 RVLLQRLKEGGMLKGDVEEMLEAGVSGVFQPHGLGHLIGLDVHD 381


>AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA
           protein.
          Length = 491

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   SSFPDVVAGAARAAHIHY----VANNQLLNHGDLLLVDSGCQRWLYNSDISRTWPVSGLF 169
           +S+  +      ++ +HY      N++ +  GDL L D G     Y +DI+ T+P +G F
Sbjct: 242 ASYTCICGSGTNSSILHYGHAGAPNSKPVQDGDLCLFDMGANYCGYAADITCTFPANGKF 301

Query: 170 TRHQRIL*ELVLAVQKRLIE 229
           T  Q+ +   VL  +  + E
Sbjct: 302 TDDQKFIYNAVLDARNAVTE 321



 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 280 RLLGTQLQQEGILPKNIDGHELISMAYSLCPHHVSHHLGLDVHD 411
           R+L  +L++ G+L  +++      ++    PH + H +GLDVHD
Sbjct: 338 RVLLQRLKEGGMLKGDVEEMLEAGVSGVFQPHGLGHLIGLDVHD 381


>BT001331-1|AAN71086.1|  559|Drosophila melanogaster AT18731p
           protein.
          Length = 559

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +2

Query: 74  LNHGDLLLVDSGCQRWLYNSDISRTWPVSGLFTRHQRIL*ELVLAVQKRLIEIL 235
           L+   L  +D+GCQ   Y   ++R WP SG FT  Q+++   +L +++ L  ++
Sbjct: 336 LDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIYGALLDMRRDLCSLI 389


>AE014296-3710|AAN12200.1|  534|Drosophila melanogaster CG32454-PA
           protein.
          Length = 534

 Score = 36.7 bits (81), Expect = 0.031
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +2

Query: 74  LNHGDLLLVDSGCQRWLYNSDISRTWPVSGLFTRHQRIL*ELVLAVQKRLIEIL 235
           L+   L  +D+GCQ   Y   ++R WP SG FT  Q+++   +L +++ L  ++
Sbjct: 311 LDGNGLWQMDAGCQYGGYEGGLARCWPSSGRFTPPQKMIYGALLDMRRDLCSLI 364


>BT030128-1|ABN49267.1| 1274|Drosophila melanogaster IP15561p
           protein.
          Length = 1274

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 172 APPEDPVRAGARRAETLNRNPGGAPPRADQLFDSMCRLLG-TQLQQEGI--LPKNI 330
           +PPE P+R   RR+E   R    +  R + L D     L  + +++ GI  +P+ I
Sbjct: 624 SPPETPIRKDRRRSEGSERPGSNSRERLNNLVDKKSEALNKSVIREHGIDSIPEEI 679


>AY061475-1|AAL29023.1| 1280|Drosophila melanogaster LD44171p
           protein.
          Length = 1280

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 172 APPEDPVRAGARRAETLNRNPGGAPPRADQLFDSMCRLLG-TQLQQEGI--LPKNI 330
           +PPE P+R   RR+E   R    +  R + L D     L  + +++ GI  +P+ I
Sbjct: 630 SPPETPIRKDRRRSEGSERPGSNSRERLNNLVDKKSEALNKSVIREHGIDSIPEEI 685


>AE014296-394|AAF47597.2| 1280|Drosophila melanogaster CG1960-PA,
           isoform A protein.
          Length = 1280

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 172 APPEDPVRAGARRAETLNRNPGGAPPRADQLFDSMCRLLG-TQLQQEGI--LPKNI 330
           +PPE P+R   RR+E   R    +  R + L D     L  + +++ GI  +P+ I
Sbjct: 630 SPPETPIRKDRRRSEGSERPGSNSRERLNNLVDKKSEALNKSVIREHGIDSIPEEI 685


>AE014296-393|AAN11507.1| 1259|Drosophila melanogaster CG1960-PB,
           isoform B protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 172 APPEDPVRAGARRAETLNRNPGGAPPRADQLFDSMCRLLG-TQLQQEGI--LPKNI 330
           +PPE P+R   RR+E   R    +  R + L D     L  + +++ GI  +P+ I
Sbjct: 609 SPPETPIRKDRRRSEGSERPGSNSRERLNNLVDKKSEALNKSVIREHGIDSIPEEI 664


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,001,607
Number of Sequences: 53049
Number of extensions: 606712
Number of successful extensions: 2258
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2256
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)