BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0176X.Seq (494 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 1.5 Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 22 2.6 AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 2.6 EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6 EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6 AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 6.1 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.1 AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 8.1 AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 8.1 AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.1 >X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. Length = 524 Score = 23.0 bits (47), Expect = 1.5 Identities = 15/59 (25%), Positives = 22/59 (37%) Frame = -1 Query: 179 PIKNGHAPPPTESRKSC*SVNPSGVRAW*DFPC*VKLSRRLHSWWCPSVNSFKFQLCNH 3 P N H T K C V + + W ++ +RL CP + +K L H Sbjct: 191 PKVNSHGKIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYH 249 >Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor 5-like protein protein. Length = 162 Score = 22.2 bits (45), Expect = 2.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 196 PDKSLHQLRTAMHHHPPNQERAVNLSTL 113 P +S H+L T + +PPN AV S+L Sbjct: 44 PLESNHKLVTFILKNPPNLNPAVQGSSL 71 >AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface protein chaoptin protein. Length = 782 Score = 22.2 bits (45), Expect = 2.6 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -2 Query: 211 RYRN*PDKSLHQLRTAMHHH 152 R RN PD S H LR+ H Sbjct: 53 RLRNVPDNSFHFLRSLKKVH 72 >EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 311 Score = 21.4 bits (43), Expect = 4.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 485 WGIIGNPIPQHEVVSAGCP 429 W +IG P ++ +V A CP Sbjct: 177 WYLIGMPGKKNTIVYACCP 195 >EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 311 Score = 21.4 bits (43), Expect = 4.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 485 WGIIGNPIPQHEVVSAGCP 429 W +IG P ++ +V A CP Sbjct: 177 WYLIGMPGKKNTIVYACCP 195 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 21.4 bits (43), Expect = 4.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 485 WGIIGNPIPQHEVVSAGCP 429 W +IG P ++ +V A CP Sbjct: 177 WYLIGMPGKKNTIVYACCP 195 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 21.4 bits (43), Expect = 4.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 485 WGIIGNPIPQHEVVSAGCP 429 W +IG P ++ +V A CP Sbjct: 177 WYLIGMPGKKNTIVYACCP 195 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 21.4 bits (43), Expect = 4.6 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 485 WGIIGNPIPQHEVVSAGCP 429 W +IG P ++ +V A CP Sbjct: 177 WYLIGMPGKKNTIVYACCP 195 >AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription factor protein. Length = 441 Score = 21.0 bits (42), Expect = 6.1 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 380 TRATLKESACSPLPI 424 TR TLK + SP P+ Sbjct: 256 TRTTLKNNRASPYPM 270 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 20.6 bits (41), Expect = 8.1 Identities = 7/22 (31%), Positives = 11/22 (50%) Frame = -3 Query: 483 GDNWKPDSPARSSFSGLPGPIG 418 G ++PDSP+ + P G Sbjct: 105 GQEYRPDSPSSMHMANTAAPNG 126 >AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor candidate 49 protein. Length = 418 Score = 20.6 bits (41), Expect = 8.1 Identities = 6/29 (20%), Positives = 16/29 (55%) Frame = -3 Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28 ++ G+++FP+ + + L +PF + Sbjct: 59 YKLLGIIQFPISAHFSFMSRFLCLPFYSY 87 >AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor candidate 14 protein. Length = 374 Score = 20.6 bits (41), Expect = 8.1 Identities = 6/29 (20%), Positives = 16/29 (55%) Frame = -3 Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28 ++ G+++FP+ + + L +PF + Sbjct: 15 YKLLGIIQFPISAHFSFMSRFLCLPFYSY 43 >AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless protein. Length = 325 Score = 20.6 bits (41), Expect = 8.1 Identities = 7/22 (31%), Positives = 11/22 (50%) Frame = -3 Query: 483 GDNWKPDSPARSSFSGLPGPIG 418 G ++PDSP+ + P G Sbjct: 107 GQEYRPDSPSSMHMANTAAPNG 128 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 119,254 Number of Sequences: 336 Number of extensions: 2497 Number of successful extensions: 13 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 11630247 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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