Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0176X.Seq
(494 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 1.5
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 22 2.6
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 2.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 6.1
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 8.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 8.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.1
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.0 bits (47), Expect = 1.5
Identities = 15/59 (25%), Positives = 22/59 (37%)
Frame = -1
Query: 179 PIKNGHAPPPTESRKSC*SVNPSGVRAW*DFPC*VKLSRRLHSWWCPSVNSFKFQLCNH 3
P N H T K C V + + W ++ +RL CP + +K L H
Sbjct: 191 PKVNSHGKIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYH 249
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 22.2 bits (45), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 196 PDKSLHQLRTAMHHHPPNQERAVNLSTL 113
P +S H+L T + +PPN AV S+L
Sbjct: 44 PLESNHKLVTFILKNPPNLNPAVQGSSL 71
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 211 RYRN*PDKSLHQLRTAMHHH 152
R RN PD S H LR+ H
Sbjct: 53 RLRNVPDNSFHFLRSLKKVH 72
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 485 WGIIGNPIPQHEVVSAGCP 429
W +IG P ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 485 WGIIGNPIPQHEVVSAGCP 429
W +IG P ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 485 WGIIGNPIPQHEVVSAGCP 429
W +IG P ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 485 WGIIGNPIPQHEVVSAGCP 429
W +IG P ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 485 WGIIGNPIPQHEVVSAGCP 429
W +IG P ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 380 TRATLKESACSPLPI 424
TR TLK + SP P+
Sbjct: 256 TRTTLKNNRASPYPM 270
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.6 bits (41), Expect = 8.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -3
Query: 483 GDNWKPDSPARSSFSGLPGPIG 418
G ++PDSP+ + P G
Sbjct: 105 GQEYRPDSPSSMHMANTAAPNG 126
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 20.6 bits (41), Expect = 8.1
Identities = 6/29 (20%), Positives = 16/29 (55%)
Frame = -3
Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28
++ G+++FP+ + + L +PF +
Sbjct: 59 YKLLGIIQFPISAHFSFMSRFLCLPFYSY 87
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 20.6 bits (41), Expect = 8.1
Identities = 6/29 (20%), Positives = 16/29 (55%)
Frame = -3
Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28
++ G+++FP+ + + L +PF +
Sbjct: 15 YKLLGIIQFPISAHFSFMSRFLCLPFYSY 43
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 20.6 bits (41), Expect = 8.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -3
Query: 483 GDNWKPDSPARSSFSGLPGPIG 418
G ++PDSP+ + P G
Sbjct: 107 GQEYRPDSPSSMHMANTAAPNG 128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,254
Number of Sequences: 336
Number of extensions: 2497
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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