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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0176X.Seq
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   2.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.6  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.6  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.6  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.1  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 15/59 (25%), Positives = 22/59 (37%)
 Frame = -1

Query: 179 PIKNGHAPPPTESRKSC*SVNPSGVRAW*DFPC*VKLSRRLHSWWCPSVNSFKFQLCNH 3
           P  N H    T   K C  V  + +  W      ++  +RL    CP +  +K  L  H
Sbjct: 191 PKVNSHGKIKTFKCKQCDFVAITKLEQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYH 249


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 196 PDKSLHQLRTAMHHHPPNQERAVNLSTL 113
           P +S H+L T +  +PPN   AV  S+L
Sbjct: 44  PLESNHKLVTFILKNPPNLNPAVQGSSL 71


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 211 RYRN*PDKSLHQLRTAMHHH 152
           R RN PD S H LR+    H
Sbjct: 53  RLRNVPDNSFHFLRSLKKVH 72


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 WGIIGNPIPQHEVVSAGCP 429
           W +IG P  ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 WGIIGNPIPQHEVVSAGCP 429
           W +IG P  ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 WGIIGNPIPQHEVVSAGCP 429
           W +IG P  ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 WGIIGNPIPQHEVVSAGCP 429
           W +IG P  ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 485 WGIIGNPIPQHEVVSAGCP 429
           W +IG P  ++ +V A CP
Sbjct: 177 WYLIGMPGKKNTIVYACCP 195


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 380 TRATLKESACSPLPI 424
           TR TLK +  SP P+
Sbjct: 256 TRTTLKNNRASPYPM 270


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 483 GDNWKPDSPARSSFSGLPGPIG 418
           G  ++PDSP+    +    P G
Sbjct: 105 GQEYRPDSPSSMHMANTAAPNG 126


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/29 (20%), Positives = 16/29 (55%)
 Frame = -3

Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28
           ++  G+++FP+ +     +  L +PF  +
Sbjct: 59  YKLLGIIQFPISAHFSFMSRFLCLPFYSY 87


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/29 (20%), Positives = 16/29 (55%)
 Frame = -3

Query: 114 FRCPGLVRFPVLSQIKPQAPLLVVPFRQF 28
           ++  G+++FP+ +     +  L +PF  +
Sbjct: 15  YKLLGIIQFPISAHFSFMSRFLCLPFYSY 43


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 483 GDNWKPDSPARSSFSGLPGPIG 418
           G  ++PDSP+    +    P G
Sbjct: 107 GQEYRPDSPSSMHMANTAAPNG 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,254
Number of Sequences: 336
Number of extensions: 2497
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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