Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0173X.Seq
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    57   4e-07
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    38   0.24 
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.24 
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    35   1.7  
UniRef50_Q4YNW0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.2  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = +1

Query: 511 TRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLTPRAGSG 633
           TRLALQ  LVK FKV SF+L+GL RV Y YFSSL PR GSG
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +3

Query: 576 PRKSPVSLFFVTNSPCREW 632
           PRKSPV LFFVT SP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTNQYEYTQ 149
           GKCFR C S ++ RISPLT++Y+  Q
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_Q4YNW0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 575

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +2

Query: 65  HLWQMLSLMFVLRRSKNFTSNESIRIHPVIPINHYLGVLKTNKIEP-RSYSIIPCTKYSS 241
           H+++ +   ++   + N  +NE I+I     +NH+L ++ +NK+   + Y +I    + S
Sbjct: 102 HIFKTIEEKYICSTNNNNKANEQIQIEEKSVLNHFLYLMDSNKLNSIKEYQMI-YIDFDS 160

Query: 242 SIFSRFEHSNLFKVKLSAHLD 304
            IF   +  N+  +  S H++
Sbjct: 161 CIFDTIQKMNIRNI--SEHIN 179


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,962,070
Number of Sequences: 1657284
Number of extensions: 12833298
Number of successful extensions: 28635
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28630
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)