Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0173X.Seq
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.2
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 23 2.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 8.7
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 442 NYELFNRNNFSIRYWSWNYRGCCTRL 519
N + N NN+ Y + NY C +L
Sbjct: 87 NRTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 442 NYELFNRNNFSIRYWSWNYRGCCTRL 519
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 442 NYELFNRNNFSIRYWSWNYRGCCTRL 519
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 442 NYELFNRNNFSIRYWSWNYRGCCTRL 519
N + N NN+ Y + NY C +L
Sbjct: 87 NKTIHNNNNYKYNYNNNNYNNNCKKL 112
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 129 SLEVKFLDRRKTNISESICQRCFHQSRTK--VRGSKAIRYRPSS 4
SL+ F D+ + + + +C+ C + RTK + K++++R SS
Sbjct: 20 SLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSS 63
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 105 RRKTNISESICQRCFHQ 55
RR+ N++E++C F Q
Sbjct: 966 RRRLNVNETVCSDYFSQ 982
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 442 NYEL-FNRNNFSIRYWSWNYRGCCTRL 519
NY+ +N NN++ ++ NY C +L
Sbjct: 328 NYKYNYNNNNYNNNNYNNNYNNNCKKL 354
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SAAHKCNYELFNRNNFSIRYWSWNY 498
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SAAHKCNYELFNRNNFSIRYWSWNY 498
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SAAHKCNYELFNRNNFSIRYWSWNY 498
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SAAHKCNYELFNRNNFSIRYWSWNY 498
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 424 SAAHKCNYELFNRNNFSIRYWSWNY 498
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 8.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 490 WNYRGCCTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLT 615
WN LA+ LFL + V+ L L V RY + T
Sbjct: 39 WNLATDRAGLAILLFLFSVATVFGNTLVILAVVRERYLHTAT 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,716
Number of Sequences: 438
Number of extensions: 4629
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -