Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0172.Seq
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    24   1.1  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   1.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.7  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 497 LATLRLRRKRTPSVWRLRRKRTPSVWRSR 583
           L+T    +   PS W  RRK   +  RSR
Sbjct: 125 LSTTTQNKNDDPSYWEKRRKNNEAAKRSR 153


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 17/57 (29%), Positives = 22/57 (38%)
 Frame = +2

Query: 98  SGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVIRKNRTKPDKVKLKA 268
           +G     + A   A +  TTG    DP       G G   +  RKN T+     LKA
Sbjct: 45  AGGTAADMSAWTSAGLQPTTGYYPYDPALAAYGYGAGYDLAARRKNATRESTATLKA 101


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 613 YLLAPLWEDRTAQEKPLYVARAVHEGA 693
           Y L   WE  T Q  PLY +    EG+
Sbjct: 211 YDLHGSWESVTGQNAPLYASSIDVEGS 237


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
 Frame = +3

Query: 516  GGNVPPPSGGYG----GNVPPPSGG 578
            G  VPPPSG  G    G+  PP  G
Sbjct: 1108 GTAVPPPSGSSGPGSTGSKSPPVAG 1132



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 549  GGNVPPPSGGAG 584
            G  VPPPSG +G
Sbjct: 1108 GTAVPPPSGSSG 1119


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 SPPLRIPGLSISPYRAWFY 234
           S P R   L++  Y+AW+Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 SPPLRIPGLSISPYRAWFY 234
           S P R   L++  Y+AW+Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 SPPLRIPGLSISPYRAWFY 234
           S P R   L++  Y+AW+Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 SPPLRIPGLSISPYRAWFY 234
           S P R   L++  Y+AW+Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 SPPLRIPGLSISPYRAWFY 234
           S P R   L++  Y+AW+Y
Sbjct: 260 SRPARQIALTVPRYQAWWY 278


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 65  DNLQYQFFPVSSGSVQFKVRAAND 136
           DNLQY F    SG++ + +    D
Sbjct: 201 DNLQYSFDNQCSGTIDWALPKQED 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,917
Number of Sequences: 336
Number of extensions: 4032
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)