Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0172.Seq
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 36 0.033
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 36 0.033
04_01_0222 - 2805329-2805780,2805866-2806611,2806730-2806778,280... 36 0.033
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 36 0.033
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 34 0.100
01_07_0082 - 40965947-40967023 33 0.17
01_01_0083 + 631196-631675 33 0.17
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.31
11_03_0112 - 10135052-10135168,10135712-10135795,10135879-101359... 32 0.40
11_04_0319 - 16348349-16348591,16348818-16349066,16349827-16349832 32 0.53
08_02_1019 - 23657175-23658047 32 0.53
03_05_0663 + 26546810-26547304 31 0.70
05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621 31 0.93
04_04_0578 + 26353830-26353929,26354030-26354277,26354539-26354931 31 0.93
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.2
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 31 1.2
09_04_0377 + 17086775-17088310 30 1.6
06_01_0172 + 1362101-1363708 30 1.6
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191... 30 2.2
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 30 2.2
11_06_0283 + 21905706-21905835,21906059-21906132 29 2.8
01_06_0837 - 32328191-32328369,32328682-32328731,32328844-323289... 29 2.8
01_05_0173 + 18916930-18917324,18917542-18917638 29 2.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 2.8
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 3.8
04_04_0260 + 23996775-23996865,23997031-23997566,23998407-239988... 29 3.8
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 29 5.0
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 28 6.6
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 28 6.6
03_06_0485 + 34242121-34243188 28 6.6
02_03_0101 + 15233783-15234601 28 6.6
11_04_0355 + 16705281-16706006 28 8.7
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 28 8.7
07_03_0039 - 12718972-12720699 28 8.7
06_02_0127 + 12140843-12140966,12141170-12141567 28 8.7
06_02_0126 + 12130409-12130532,12131015-12131373 28 8.7
05_04_0114 + 18090593-18092248 28 8.7
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 28 8.7
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688... 28 8.7
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 513 YGGNVPPPSG--GYGGNVPPPSGGAG 584
YG PPP+G GYGG VPPP+ G
Sbjct: 424 YGVGAPPPTGQQGYGGGVPPPTCSGG 449
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +3
Query: 510 GYGGNVPPP--SGGYGG 554
GYGG VPPP SGG+ G
Sbjct: 436 GYGGGVPPPTCSGGHTG 452
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 513 YGGNVPPPSG--GYGGNVPPPSGGAG 584
YG PPP+G GYGG VPPP+ G
Sbjct: 424 YGVGAPPPTGQQGYGGGVPPPTCSGG 449
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +3
Query: 510 GYGGNVPPP--SGGYGG 554
GYGG VPPP SGG+ G
Sbjct: 436 GYGGGVPPPTCSGGHTG 452
>04_01_0222 -
2805329-2805780,2805866-2806611,2806730-2806778,
2807031-2807748,2808513-2808824
Length = 758
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 513 YGGNVPPPSG--GYGGNVPPPSGGAG 584
YG PPP+G GYGG VPPP+ G
Sbjct: 313 YGVGAPPPTGQQGYGGGVPPPTCSGG 338
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 2/17 (11%)
Frame = +3
Query: 510 GYGGNVPPP--SGGYGG 554
GYGG VPPP SGG+ G
Sbjct: 325 GYGGGVPPPTCSGGHTG 341
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 513 YGGNVPPPSG--GYGGNVPPPSGGAG 584
YG PPP+G GYGG VPPP+ G
Sbjct: 301 YGVGAPPPTGQQGYGGGVPPPTCSGG 326
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 510 GYGGN---VPPPSGGYGGNVPPPSGGAGIW 590
GYG + P P GGYGG P PS G G +
Sbjct: 115 GYGASPPVTPSPGGGYGGGSPAPSHGGGAY 144
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +3
Query: 510 GYGGNVPPPS---GGYGGNVPPPSGG 578
GYGG P PS G YG + PSGG
Sbjct: 129 GYGGGSPAPSHGGGAYGSSPSTPSGG 154
>01_07_0082 - 40965947-40967023
Length = 358
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
GY PPP GYG PPP G G
Sbjct: 263 GYPAQPPPPQAGYGYPPPPPQAGYG 287
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVP-PPSGGAG 584
GYG PPP GYGG PP G G
Sbjct: 274 GYGYPPPPPQAGYGGGYGYPPQAGYG 299
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 519 GNVPPPSGGYG--GNVPPPSGGAG 584
G PPP GYG PPP G G
Sbjct: 253 GTAPPPQYGYGYPAQPPPPQAGYG 276
>01_01_0083 + 631196-631675
Length = 159
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +3
Query: 522 NVPPPSGGYGGNVP---PPSGGAG 584
N PPP GG GG +P PP+GG G
Sbjct: 76 NYPPPQGGGGGYIPYYQPPAGGGG 99
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 504 P*GYGGNVPPPSGGYGGNVPPPSGGAGIWV 593
P N PP S Y N PPP GG G ++
Sbjct: 60 PSSSSSNTPPSSSSY-WNYPPPQGGGGGYI 88
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 495 PWLP*GYGGNVPPPSGGYGGNVPPPSGGAGI 587
P +P G G PPP GG G +P P GG G+
Sbjct: 1207 PPMPPGVPGGPPPPPGGRG--LPAPPGGRGV 1235
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 495 PWLP*GYGG-NVPPPSGGYGG-NVPPPSGG 578
P LP G GG PPP GG GG PPP G
Sbjct: 1139 PPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 510 GYGGN-VPPPSGGYGGNVPPPSGGAGI 587
G GG PPP G+ G PPP+ G+
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGV 1182
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 504 P*GYGGNVPPPS--GGYGGNVPPPSGGAGI 587
P G+ G PPP+ GG PPP G G+
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPPPPPRGHGGV 1195
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 525 VPPPSGGYGGNVPPPSGGAG 584
+PP G YG PPPS GAG
Sbjct: 1088 LPPTLGDYGVAPPPPSIGAG 1107
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 516 GGNVPPPSGGYGGNVPPPSGGAGI 587
G PP G G PPP GG G+
Sbjct: 1203 GAPAPPMPPGVPGGPPPPPGGRGL 1226
>11_03_0112 -
10135052-10135168,10135712-10135795,10135879-10135953,
10137801-10137978,10138048-10138212,10138291-10138337,
10140233-10140301,10140531-10140629,10141256-10141375,
10141459-10141581,10149251-10149364,10150725-10150913,
10151058-10151110,10151365-10151470,10151957-10152085
Length = 555
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -2
Query: 501 ARGCCVQCSCYRCSRWHFDFPGACGTPACADSDVVNWERFGIRPRYEWNSFTLASSGDNS 322
AR CC + RC W + G G + DV + + YE SF A SG NS
Sbjct: 37 ARDCCAKPK-KRCVDWIGEGGGLGGMEEYIEEDVGTCSAWNLEANYEVVSFIYAFSGINS 95
Query: 321 A 319
A
Sbjct: 96 A 96
>11_04_0319 - 16348349-16348591,16348818-16349066,16349827-16349832
Length = 165
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 516 GGNVPPPSGGYGGNVPPPSG 575
GG VPPPS G + PPPSG
Sbjct: 38 GGVVPPPSLARGDSAPPPSG 57
>08_02_1019 - 23657175-23658047
Length = 290
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
GY + P GG GG VP P GG G
Sbjct: 23 GYDAPMQPGLGGGGGGVPKPGGGVG 47
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
G GG VP P GG GG GG G
Sbjct: 34 GGGGGVPKPGGGVGGGGGGGGGGGG 58
>03_05_0663 + 26546810-26547304
Length = 164
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 489 STPWLP*GYGG-NVPPPSGGYGGNVPPPSGG 578
S P + G GG NVP GG+GG PSGG
Sbjct: 72 SIPGMGGGMGGFNVPGMGGGWGGGYGTPSGG 102
>05_02_0161 + 7199005-7199505,7200118-7200378,7201532-7201621
Length = 283
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAGIWVDXXXXXXXXXXXXXXXDCSGEASVCGSCG 680
G G++PPP GG PPP G V D G A V G
Sbjct: 44 GVDGDLPPPPPDDGGEFPPPPDDGGEGVSEGGAGVAGPPEADGGDAEGTAGVDAGAG 100
>04_04_0578 + 26353830-26353929,26354030-26354277,26354539-26354931
Length = 246
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 277 LNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEP 387
L G +R WV W +I AG G F+ PEP
Sbjct: 195 LVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQPEP 231
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 504 P*GYGGNVPPPSGGYGG--NVPPPSGGAG 584
P G GG PP GG GG ++PP +GG G
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAGGGG 128
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +3
Query: 510 GYGG--NVPPPSGGYGGNVPPPSGGAG 584
G GG ++PP +GG GG PP GG G
Sbjct: 113 GGGGPPSLPPGAGGGGGARPPAPGGGG 139
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +3
Query: 501 LP*GYGGNVPPPSGGYGGNVPPPSGGAG 584
LP G GG P P GG GG PP GG G
Sbjct: 90 LPPG-GGGAPGPLGG-GGARPPGGGGGG 115
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
G G PP GG GG + P GG G
Sbjct: 153 GGGALARPPGGGRGGALGRPPGGGG 177
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 447 RSATDCTCSSCIVRSTPWLP*GYGGNVPPPSGGYGGNVPPP 569
+ A SS +S P P Y G PP YGG +PPP
Sbjct: 392 QQAAQAQASSSSGQSYPMPPQYYHGQYPPYYPPYGGYMPPP 432
>09_04_0377 + 17086775-17088310
Length = 511
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 515 RRKRTPSVWRLRRKRTPSVWRSR 583
RR R+PS +R RR R+PS +R R
Sbjct: 43 RRDRSPSPYRSRRDRSPSPYRDR 65
>06_01_0172 + 1362101-1363708
Length = 535
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 KLKAPEFLTEGNIVVFGFVGIAELSPLDARVKLFHSY--LGLIPNLSQFTTSESAQAGVP 430
KL L NI++ G VGI +L DA +K+ LG+ P++ +TT SA G
Sbjct: 186 KLYITPNLVSCNILLKGLVGIGDL---DAALKVLDEMPGLGITPDVVTYTTVLSAYCGKG 242
Query: 431 QAPGKSK 451
G K
Sbjct: 243 DIEGAQK 249
>07_03_1267 +
25318220-25318407,25318674-25318844,25319086-25319188,
25319394-25319885,25320723-25321156,25321333-25321388,
25321711-25321775,25322139-25322147
Length = 505
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 534 PSGGYGGNVPPPSGGA 581
P GG GG +PPP GGA
Sbjct: 77 PDGGGGGEMPPPYGGA 92
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPP 569
G GG +PPP GG PPP
Sbjct: 80 GGGGEMPPPYGGAAAAPPPP 99
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 519 GNVPPPSGGYGGNVPPPSGG 578
G PPPS G G PPPS G
Sbjct: 125 GTAPPPSQGPFGTAPPPSQG 144
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 519 GNVPPPSGGYGGNVPPPSGG 578
G PPPS G G PPPS G
Sbjct: 136 GTAPPPSQGPFGTAPPPSQG 155
>11_06_0283 + 21905706-21905835,21906059-21906132
Length = 67
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 519 GNVPPPSGGYGGNVPPPSGGAGIWV 593
G V PPS GG P SG G+W+
Sbjct: 23 GEVDPPSLSLGGAHPLSSGSGGMWI 47
>01_06_0837 -
32328191-32328369,32328682-32328731,32328844-32328923,
32329193-32329345,32329505-32329654,32329877-32330000,
32330086-32330198,32330287-32330420,32330566-32331232
Length = 549
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 265 SPGILNGGEYRGF---WVRWDSGIISAGREGEAIPFISWSDPEPFPVYY 402
SP +L GG Y G W+R I+ G + P + + D P ++Y
Sbjct: 211 SPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFEDVVPSTIFY 259
>01_05_0173 + 18916930-18917324,18917542-18917638
Length = 163
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +3
Query: 411 LHRLGCHRLLENRSATDCTCSSCIVRSTPWLP*GYGGNVPPPSGGY 548
LHRL HRLL S S S P P G N PPP G+
Sbjct: 53 LHRLISHRLLSPTSLAHAASSPPPTLSVPPPPSGRTINHPPPLFGF 98
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
GYGG P P GG G PP GG G
Sbjct: 381 GYGGR-PMPGGGGPGAPPPYHGGGG 404
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 504 P*GYGGNVPPPSGGYGGNVPPPSGGAG 584
P G G P GGYGG P GG G
Sbjct: 368 PGGQGSLPPSYDGGYGGRPMPGGGGPG 394
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
G GG+ PPP G PP G G
Sbjct: 84 GGGGSAPPPGNLAGSGTPPAKGSGG 108
>04_04_0260 +
23996775-23996865,23997031-23997566,23998407-23998892,
23998989-23999152,23999220-23999281,23999753-23999907,
24000625-24000738,24001701-24002233,24002512-24002609,
24003108-24003398,24003764-24003830,24003905-24003983
Length = 891
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 359 GIASPSRPAEIIPLSQRTQKPRYSPPLRIPGLSISP 252
G+ S R P ++R ++ +PP PGLS+SP
Sbjct: 560 GMESHRRAPPFFPNAERRRRQPKTPPSSPPGLSVSP 595
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGG 578
GY G PPP Y GN P GG
Sbjct: 318 GYQGPPPPPPSAYQGNNPGYQGG 340
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 504 P*GYGGNVPPPSGGYGGN 557
P G+ NVPP GYGGN
Sbjct: 313 PWGHPSNVPPGGPGYGGN 330
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = -2
Query: 426 TPACADSDVVNWERFGIRPRYEWNSFTLASSGDNSAIPTNPKTTIFPSVKNSGAFNFTLS 247
TP S+V++ R G+ + + D +PT P T++ PS +N+G F T
Sbjct: 288 TPPRFPSEVIDCIRQGVSILFRCLGLRDFARIDGWFLPT-PVTSL-PSAENTGKFGNTKY 345
Query: 246 GLVLFFLMTLL 214
G VLF + L+
Sbjct: 346 GAVLFTDINLM 356
>03_06_0485 + 34242121-34243188
Length = 355
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGA-GIWVD 596
G GGN +GG G V P GG+ G W D
Sbjct: 313 GPGGNGDGATGGSGAGVAPGGGGSGGGWAD 342
>02_03_0101 + 15233783-15234601
Length = 272
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 230 KNRTKPDKVKLKAPEFLTEGNIVVFGFVGIAELSPLDARVKLFHSYLGLIP 382
+ R + V + PE T+G V+ + + P+ RV+LF Y+ + P
Sbjct: 209 RRRRRSMMVHPEPPEHTTDGMPVILESMALVSTPPVAKRVRLFGVYIDVPP 259
>11_04_0355 + 16705281-16706006
Length = 241
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 185 EVMIGGWGNAKSVIRKNRTKPDKVKLKAPEFLTEG 289
E ++GG A S RK R+ DK K K P + G
Sbjct: 131 EEVVGGGKGASSRRRKKRSGKDKAKAKVPPAASAG 165
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 238 NQAR*GEIESPGILNGGE-YRGFWVRWDSGIISAGREG 348
N A+ + PGI GE + FWV G+I+ R+G
Sbjct: 349 NMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKG 386
>07_03_0039 - 12718972-12720699
Length = 575
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 297 TIFPSVKNSGAFNFTLSGLVLFFLMTLLAFPQPPIITSYIGS-DSC-GPVVSA 145
++ P+V F F S L L F LL P P +ITS + S ++C GP+ A
Sbjct: 130 SLLPAVAALAHFGFPWSRLGLLFPTVLLRLP-PDLITSRLASLEACLGPLPRA 181
>06_02_0127 + 12140843-12140966,12141170-12141567
Length = 173
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
GYGG GGYGG GG G
Sbjct: 88 GYGGGYGGYGGGYGGGYGGGGGGGG 112
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
GYGG GGYGG GG G
Sbjct: 88 GYGGGYGGYGGGYGGGYGGGGGGGG 112
>05_04_0114 + 18090593-18092248
Length = 551
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 450 SATDCTCSSCIVRSTPWLP*GYGGNVPPPSGGYGGNVP-PPSGGAGIW 590
S + T +V + P P G P GYGG+ P S A +W
Sbjct: 501 SVSTWTARRVLVPAPPLWPPAAAGGAGPSGSGYGGDGPSTASSSAAMW 548
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 256 EIESPGILNGGEYRGFWVRWDSGIIS--AGREGEAIPFISWSDPEP-FPVYYVGVCTGW 423
++ G+ ++ +W+ G+IS GR W DP+P V YVG+ + W
Sbjct: 89 DVAGIGLCCSSSFQSYWISIYDGLISIGQGRHPNNNILFQWLDPDPNRNVQYVGL-SSW 146
>01_05_0791 +
25267885-25267930,25268258-25268713,25268802-25268832,
25268949-25269255
Length = 279
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 504 P*GYGGNVPPPSGGYGGNVPPPSGGAG 584
P YG PP GG+G N PP G G
Sbjct: 225 PPDYGSMSPP--GGFGSNSPPDYGDVG 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,285,821
Number of Sequences: 37544
Number of extensions: 549145
Number of successful extensions: 2408
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -