Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0172.Seq
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         28   0.34 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.4  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        25   2.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.5  
EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.         24   5.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   7.3  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.6  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 643 TAQEKPLYVARAVHEGATIPGKLVPSH 723
           T+  + LYV RA HEG+   GK+  SH
Sbjct: 95  TSDGEILYVGRAYHEGSQTIGKVQCSH 121



 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 661 LYVARAVHEGATIPGKLVP 717
           ++V RA H G  +P K++P
Sbjct: 30  IFVGRAHHAGDLLPAKVIP 48


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +3

Query: 510 GYGGNVPPPSGGYGGNVPPPSGGAG 584
           G GG  P   GG  G  P P GG G
Sbjct: 206 GSGGGAPGGGGGSSGG-PGPGGGGG 229


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +1

Query: 574 EEPVYGLMFQEVKYLLAPLWEDRTAQEKPLYVARAVHEGATIPGKLVP 717
           +EP+     +++ Y+   + E          VAR   E  T+ G+L+P
Sbjct: 192 DEPITEEKLKQLSYMECVIKESLRLAPPGATVAREAQEDLTVEGQLIP 239


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 350 SPSRPAEIIPLSQRTQKPRYSPPLRIPGLSISP 252
           SPS P  I+P  QR    R     R   +S SP
Sbjct: 203 SPSHPQPIVPQPQRASLERRDSLFRPYDISKSP 235


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 350 SPSRPAEIIPLSQRTQKPRYSPPLRIPGLSISP 252
           SPS P  I+P  QR    R     R   +S SP
Sbjct: 203 SPSHPQPIVPQPQRASLERRDSLFRPYDISKSP 235


>EF426175-1|ABO26418.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 387 FPSLLRRSLHRLGCHRLLENRSATDCTCSSCIVRST 494
           F +LL +S+  L C++     S +DC  S+  V  T
Sbjct: 16  FGALLAQSVSALRCYQCASPSSWSDCQASAQSVECT 51


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 242 KPDKVKLKAPEFLTEGNI 295
           +P KVKL+ PEF  E  +
Sbjct: 386 EPSKVKLQLPEFKAETTV 403


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +2

Query: 29  TIMANVMDVATDDNLQYQFFPVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGW 205
           T  A V    TD+N+QY +       + F V  +ND  I+     +++ P        W
Sbjct: 473 TFSARVGRGLTDENMQYMYRKAYRDKLSFSV--SNDQMISFAQFCKDTTPECNYTFWEW 529


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 717 RNEFTRDRGTFVNRTSHIQRLLLSSPVLPQRRQEVLD 607
           R EFT    T     +H++ L +    LPQ  + V D
Sbjct: 802 RKEFTELPDTIELVDAHLEELRVRFECLPQANESVAD 838


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,315
Number of Sequences: 2352
Number of extensions: 18445
Number of successful extensions: 190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)