Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0172.Seq
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 24 1.7
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 9.0
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 510 GYGGNVPPPSGGYGGNVPPPSG 575
GY P P G+ G+ P P+G
Sbjct: 109 GYRSASPSPGMGHMGHTPTPNG 130
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 525 VPPPSGGYGGNVPPPSGGAGI 587
VP P Y GN PP S G I
Sbjct: 115 VPVPVPVYYGNFPPRSMGPWI 135
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 525 VPPPSGGYGGNVPPPSGGAGI 587
VP P Y GN PP S G I
Sbjct: 115 VPVPVPVYYGNFPPRSMGPWI 135
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 525 VPPPSGGYGGNVPPPSGGAGI 587
VP P Y GN PP S G I
Sbjct: 115 VPVPVPVYYGNFPPRSMGPWI 135
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 525 VPPPSGGYGGNVPPPSGGAGI 587
VP P Y GN PP S G I
Sbjct: 348 VPVPVPVYYGNFPPRSMGPWI 368
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 114 PVPFPVYY 121
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 528 PPPSGGYGGNVPPPSG 575
P P G+ G + PP G
Sbjct: 1749 PHPGNGHSGTMGPPVG 1764
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 347 PVPFPVYY 354
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 379 PEPFPVYY 402
P PFPVYY
Sbjct: 336 PVPFPVYY 343
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 690 TFVNRTSHIQRLLLSSPVLPQR 625
+ +NRT++I L+ P+L +R
Sbjct: 260 SILNRTNNIFELVTVEPILTER 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,742
Number of Sequences: 438
Number of extensions: 5144
Number of successful extensions: 29
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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