Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0170.Seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   5.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 659 TVLSFCCASFYYCY 618
           +  S C   FYYCY
Sbjct: 242 STFSICITQFYYCY 255


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 22  KEEKDVEXXXXXXXXXXXQPDSKSDTDAK-ETGGDLTSASDTKIDSNSLNESESKS 186
           KEEKD+E           +PD   D   + E   + +    +K   +S++E   KS
Sbjct: 121 KEEKDMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLFSSKTSEHSVDELSGKS 176


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 308 FIHKQRQY*FCHFRPRGKEIHQRRYSETFESN 403
           F + + +Y  C FRPR   I  + ++++ ESN
Sbjct: 394 FRNNRDEYNVC-FRPRNNSILIKNFNDSPESN 424


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 493  GFGTGLKWGLPKSDFDSDLGVDE 425
            G G G+ W L   DF +  G +E
Sbjct: 2156 GLGGGMIWALDLDDFKNLCGCEE 2178


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 268 DLEMNLGMKKVFHLTRRRRDFWVLGNGKIYFRFHLEN 158
           DL+    + + F+L   +    V  NG + FRF  +N
Sbjct: 627 DLDRRGLLHRQFNLPPSKDTIAVPNNGYVIFRFRADN 663


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 72  LFCSFFWCRGFNVF 31
           L C +++CR F +F
Sbjct: 295 LLCIYYFCRAFIIF 308


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 506 SNSPDVQTETIKNNSWHLGTFKSTPTY 586
           +N P VQ E ++     LG  K  P Y
Sbjct: 13  ANHPTVQEEIVQEMKDVLGDTKKKPVY 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,663
Number of Sequences: 336
Number of extensions: 3061
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)