Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0170.Seq
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.9  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   6.7  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       23   6.7  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   6.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.8  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 312 FTSKDSIDSATSVLEERRFTRD 377
           FT+K S+D   +  E++RF+R+
Sbjct: 911 FTAKSSLDERGAAKEDKRFSRE 932


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 489 LARD*SGD-YQNLISILTSAWTRNRA*TATLDSKVS 385
           LA D +G  Y+N++S L+ +WT     ++ L+  VS
Sbjct: 354 LAEDETGQWYRNVLSRLSGSWTARERDSSVLEVIVS 389


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 518 DVQTETIKNNSWHLGTFKSTPTYKSEASPLNRID 619
           DVQT  +K  SW    FK    +  E S  N +D
Sbjct: 162 DVQTCVLKLGSWTYDGFKVDLRHMDEKSGSNIVD 195


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 454 DFDSDLGVDEESGLDCDIG 398
           +FD D   D++S  D D+G
Sbjct: 321 EFDDDFPFDDDSDFDDDVG 339


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 454 DFDSDLGVDEESGLDCDIG 398
           +FD D   D++S  D D+G
Sbjct: 91  EFDDDFPFDDDSDFDDDVG 109


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 454 DFDSDLGVDEESGLDCDIG 398
           +FD D   D++S  D D+G
Sbjct: 91  EFDDDFPFDDDSDFDDDVG 109


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 97   TDAKETGGDLT-SASDTKIDSNSLNES 174
            +D     GD T SAS  +++S SLNES
Sbjct: 989  SDDGSFAGDKTHSASPNRLESPSLNES 1015


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,588
Number of Sequences: 2352
Number of extensions: 12244
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)