Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0170.Seq
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.2
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.0
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 2.0
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.0
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 2.0
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.7
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 6.1
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 518 DVQTETIKNNSWHLGTFKSTPTYKSEASPLNRID 619
DVQT +K SW FK + E S N +D
Sbjct: 163 DVQTCVLKLGSWTYDGFKVDLRHMDEKSGSNVVD 196
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 49 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 81
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 189 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 221
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 217 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 249
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 245 IPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPR 277
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 50 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 82
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 78 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 110
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 106 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 138
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +1
Query: 145 KIDSNSLNESESKSFHF 195
+ D+NS+NE ES+ F++
Sbjct: 122 RADANSVNELESQGFNY 138
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 21 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 53
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 49 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 81
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 77 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 109
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 105 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 137
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 133 IPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPR 165
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR V QPR
Sbjct: 161 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 193
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 421 IPRPRRGQNRNQILVVPTLVPCQNRTVKFKQPR 519
IP+PR R + P P NR + QPR
Sbjct: 50 IPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPR 82
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 545 NSWHLGTFKSTPTYKSEASPLNRI 616
+ W TF + P YK S LN I
Sbjct: 74 DQWRGMTFVTVPRYKGVPSSLNVI 97
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,082
Number of Sequences: 438
Number of extensions: 3617
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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