Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0169.Seq
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 89 5e-18
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 87 1e-17
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 79 3e-15
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 78 9e-15
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 77 2e-14
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 73 2e-13
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 73 2e-13
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 8e-13
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 8e-13
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 71 8e-13
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 71 1e-12
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 67 2e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 65 5e-11
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 60 3e-09
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 54 1e-07
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 52 4e-07
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 52 4e-07
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 48 1e-05
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 47 2e-05
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 47 2e-05
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 46 3e-05
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 46 4e-05
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 43 3e-04
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 43 3e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 42 4e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 7e-04
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 39 0.004
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 37 0.015
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 37 0.020
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 36 0.027
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 32 0.44
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 32 0.58
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 4.1
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 28 9.5
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 105 bits (253), Expect = 3e-23
Identities = 44/79 (55%), Positives = 61/79 (77%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 435
P +HGD+ QQER+E L F++GR +L+AT+VAARGLD+D +K+VINFD P+ ++Y+
Sbjct: 988 PTTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYV 1047
Query: 436 HRIGRTGRSKSKGTSYAFF 492
HRIGRTGR +KG + FF
Sbjct: 1048 HRIGRTGRIGNKGKATTFF 1066
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
+E+++LA D+L DY+ + +G + +I Q V ++EK ++L +L + G
Sbjct: 909 EEIQRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRLTQILGDAGTD---- 963
Query: 182 AKTIIFVETKRKAE 223
+T++FVE+KR A+
Sbjct: 964 -RTLVFVESKRSAD 976
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 94.7 bits (225), Expect = 7e-20
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
+HGD++Q+ER+E L F+ G ILVAT VAARGLD+ +K+VINFD P E+Y+HRIG
Sbjct: 1130 IHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIG 1189
Query: 448 RTGRSKSKGTSYAFFTPSN 504
RTGR G + +FF N
Sbjct: 1190 RTGRVGHTGLATSFFNHKN 1208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
KE++ LA D+L +YI + +G + S + NI Q V E +K + L LL G P
Sbjct: 1046 KEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDLLNASG----PQ 1100
Query: 182 AKTIIFVETKRKAENISRNIRRYG 253
T++FVETK+ A+ + + + G
Sbjct: 1101 QLTLVFVETKKGADALEMFLAKDG 1124
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1
Query: 286 QQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSK 465
Q +R++ L FK G A IL+ATDVA+RGLD+ I YVIN+D+P EDY+HR+GRTGR+
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAG 137
Query: 466 SKGTSYAFFT 495
GTS F +
Sbjct: 138 RSGTSLTFIS 147
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 88.6 bits (210), Expect = 5e-18
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +2
Query: 2 KEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPG 181
KEV+ LA D+L DY+ I +GSL L+ANH ILQIVD+C++HEKE+ + + G
Sbjct: 249 KEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHNVGSFIG--GIVILSS 306
Query: 182 AKTIIFVETKRKAENISRNIRRYGC 256
+T+IF ETKR+A+ ++R +R GC
Sbjct: 307 LQTLIFTETKRRADELTRKLRSDGC 331
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +1
Query: 373 DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSLKPK 519
D+ IK+VINFD+PN +EDY+HRIGRT RS GTSY FFT +N+ + K
Sbjct: 351 DISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAK 399
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 510 QAKDLVSVLQEANQMISPQLQSMAD 584
QAK+LVSVLQEA Q ++P+L ++ D
Sbjct: 397 QAKELVSVLQEAKQHVNPKLLNLQD 421
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 88.2 bits (209), Expect = 6e-18
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +1
Query: 196 FC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLD 375
FC + K ++ +E MHGD Q+ER+ ++ F+ G++ +L++TDV ARGLD
Sbjct: 242 FCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLD 301
Query: 376 VDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
V + VIN+D PN+ E YIHRIGR+GR KG + F
Sbjct: 302 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 339
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 438
A +HG + Q++R+ L K G ILVATDVA RG+D+ + +VIN+D + EDY H
Sbjct: 311 ATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTH 370
Query: 439 RIGRTGRSKSKGTSYAFFTPSNS 507
RIGRTGR+ G + +F T S+S
Sbjct: 371 RIGRTGRAGKTGIAVSFLTQSDS 393
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 79.4 bits (187), Expect = 3e-15
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
+H +K Q R +++ F++G+ ILVATDVA+RGLD + +VIN+D P++ E YIHR G
Sbjct: 362 LHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCG 421
Query: 448 RTGRSKSKGTSYAFFT 495
RTGR G + +F T
Sbjct: 422 RTGRIGHHGIATSFLT 437
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 77.8 bits (183), Expect = 9e-15
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
+HGD Q++R+ L F+EG+ LVATDVAARGLD+ I V+ + P + YIHR G
Sbjct: 334 LHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSG 393
Query: 448 RTGRSKSKGTSYAFFTP 498
RTGR+ +G F+ P
Sbjct: 394 RTGRAGREGICIVFYKP 410
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 77.0 bits (181), Expect = 2e-14
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Frame = +1
Query: 229 IKEHQEIW----LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYV 396
+K H E+ LP + +HG + QQ+R ++F ++ IL+ TDVAARGLD+ + ++
Sbjct: 831 VKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWI 890
Query: 397 INFDYPNSSEDYIHRIGRTGR-SKSKGTSYAFFTPSNSLKPKIWYLFYKKLIR*LAHN 567
+ +D + ++YIHR+GRT R ++ KG + F P + YL + KL R + N
Sbjct: 891 VQYDPADDPKEYIHRVGRTARGTEGKGHALLFLLPEE--LAFLRYLKHAKLERLIEKN 946
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = +1
Query: 232 KEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDY 411
+E + + L A G+ + R E +F+ A ILV TD+A+RGLD + +VINFD+
Sbjct: 714 EEREVVALRATKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDF 773
Query: 412 PNSSEDYIHRIGRTGR 459
PNS DYIHR+GRTGR
Sbjct: 774 PNSMVDYIHRVGRTGR 789
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSS 423
++ L V +H +Q ER L +FK G ILVATDVA+RGLD+ ++ V+N + P
Sbjct: 269 KLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADP 328
Query: 424 EDYIHRIGRTGRSKSKGTSYAFFT 495
+DYIHR+GRT R+ G + + T
Sbjct: 329 KDYIHRVGRTARAGRGGMAISMVT 352
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +1
Query: 256 PAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 435
PA+C+H Q+ER QFK +LVAT++ RG+D++ + V N+D P S+ Y+
Sbjct: 361 PAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYL 420
Query: 436 HRIGRTGRSKSKGTSYAFFTPSNSLK 513
HR+ R GR +KG + F + K
Sbjct: 421 HRVARAGRFGTKGLAITFVSDEADAK 446
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSS 423
E+ +H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +S
Sbjct: 313 ELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNS 372
Query: 424 EDYIHRIGRTGRSKSKGTSYAFFT 495
E Y+HRIGR+GR G + T
Sbjct: 373 ETYLHRIGRSGRFGHLGVAINLIT 396
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +1
Query: 244 EIWLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSS 423
E+ +H +Q R+ V + F++G LV +D+ RG+D+ + VINFD+P +S
Sbjct: 313 ELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNS 372
Query: 424 EDYIHRIGRTGRSKSKGTSYAFFT 495
E Y+HRIGR+GR G + T
Sbjct: 373 ETYLHRIGRSGRFGHLGVAINLIT 396
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
MHGD +Q+ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHR
Sbjct: 360 MHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHRCT 419
Query: 448 RTGRSKS 468
+KS
Sbjct: 420 DDDDTKS 426
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 438
AV +HGDK+Q+ER + +F +G +LVATDVA++GLD I++VINFD P E+Y+
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVL 173
Query: 439 RIGR 450
G+
Sbjct: 174 LCGQ 177
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 259 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 438
AV +HGDK+Q+ER + +F +G +LVATDVA++GLD I++VINFD P E+Y+
Sbjct: 114 AVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVL 173
Query: 439 RIGR 450
G+
Sbjct: 174 LCGQ 177
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 71.3 bits (167), Expect = 8e-13
Identities = 29/75 (38%), Positives = 47/75 (62%)
Frame = +1
Query: 265 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 444
C G +TQ +R E + + K IL++TD+ ARG+D + + V+N D P++ E Y+HRI
Sbjct: 243 CTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRI 302
Query: 445 GRTGRSKSKGTSYAF 489
GR GR ++G + +
Sbjct: 303 GRAGRFGTEGMAVTY 317
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 70.9 bits (166), Expect = 1e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
+H D+TQ +RD ++ F+ G+ +L+AT++ RG+D G+ VIN+D+P S+ YIHRIG
Sbjct: 413 IHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 447
+H Q++R + L +FK +L+ATDVAARGLD+ I++VI++ P E Y+HR G
Sbjct: 486 LHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEVYVHRSG 545
Query: 448 RTGRSKSKGTSYAFFTPSN 504
RT R+ +G S P +
Sbjct: 546 RTARASHEGLSVVLVGPED 564
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/80 (36%), Positives = 50/80 (62%)
Frame = +1
Query: 262 VCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 441
+ +HG K + R ++ F++ + ILV TDV ARG+D+ + +VI +D P+S+ ++HR
Sbjct: 119 MALHG-KMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHR 177
Query: 442 IGRTGRSKSKGTSYAFFTPS 501
GRT R ++G + F P+
Sbjct: 178 CGRTARIGNEGNAVVFLLPT 197
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 65.3 bits (152), Expect = 5e-11
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSS------ED 429
+ G+ T ++R VL +F+ G+ +L+ T+V+ARG+DV+ + VIN+D P E
Sbjct: 374 LSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFET 433
Query: 430 YIHRIGRTGRSKSKGTSYAFFTPSNSLK--PKIWYLFYKKL 546
Y+HRIGRTGR G + F S+ KI F KK+
Sbjct: 434 YLHRIGRTGRFGKSGIAVNFIDGQRSMNIMKKIEEHFGKKI 474
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 313 QFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 492
QFK +LVAT++ RG+D++ + V N+D P S+ Y+HR+ R GR +KG + F
Sbjct: 7 QFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 66
Query: 493 TPSNSLK 513
+ K
Sbjct: 67 SDEADAK 73
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 313 QFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 486
+F+ + ++V TDVAARG+D+ + VINF +P ++ ++HR+GR R+ GT+Y+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVARAGRSGTAYS 577
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIK 390
+HG+ TQ +R E L +FK G ILVATD+AARGLD+ G+K
Sbjct: 38 LHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGVK 78
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 364 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 495
RG+D+ + VINFD+P +SE Y+HRIGR+GR G + T
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT 48
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +1
Query: 364 RGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 495
RG+D+ + VINFD+P +SE Y+HRIGR+GR G + T
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLIT 48
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 274 GDKTQQERDEVLYQFKEG-RASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 450
G TQ+E++EV+ +F+ G +I++AT VA GLD+D YVI +D + + GR
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNEISSVQSRGR 656
Query: 451 TGRSKSKG 474
R+K+ G
Sbjct: 657 V-RTKTGG 663
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 307 LYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 480
L F+ G+ +LV T+ RGLD + +V + P + E+Y+H GR GR GT+
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTA 528
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +1
Query: 274 GDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 453
G + ++E++ + Q S + A+RGLD+ + +VI D+ + +HR+GRT
Sbjct: 80 GTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQMLHRVGRT 139
Query: 454 GRSKSKGTSYAFFT 495
R+ S G F T
Sbjct: 140 ARAGSHGKVVNFIT 153
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 462
+Q+E+ EV+++F+ G + LV+T V GLD+ + ++ FD S + R+GRTGR
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGRK 624
Query: 463 K 465
+
Sbjct: 625 R 625
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +1
Query: 292 ERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 468
++++VL F++ + ++LVAT V GLDV +V+ FD+P + Y+ GR R+K+
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQSKGR-ARAKN 189
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 322 EGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 498
E R+ ++VAT G+D +++VI+ + S E+Y GR GR + + + F+ P
Sbjct: 350 ESRSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFYRP 408
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFK--EGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 441
+H ++ +D +L FK +G +LVAT G+D G+ I+F + E +I
Sbjct: 206 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQE 265
Query: 442 IGRTGRSKSKGTSYAFF 492
GR GR SY +
Sbjct: 266 TGRAGRDWKSSFSYLLY 282
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 450
H + +R +V +F G + AT GLD ++ +I+++ P S E Y+ IGR
Sbjct: 819 HAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGR 878
Query: 451 TGRSKSKGTSYAF 489
GR + F
Sbjct: 879 AGRDGKPSHCHVF 891
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 432
L A H +RD+V ++ EG+ +++ AT G+D +++V ++ P S E Y
Sbjct: 273 LSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMGVDKGDVRFVAHWSLPQSMEGY 332
Query: 433 IHRIGRTGRSKSKGTSYAFFT 495
GR GR F++
Sbjct: 333 YQESGRAGRDGQPSYCRLFYS 353
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFD-YPNSSEDYIHRIGRTGR 459
+QQE++ ++ +FK+G +IL+AT VA GLD+ +VI +D Y N I GR
Sbjct: 983 SQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYDTYGNE----ISSTQARGR 1038
Query: 460 SKSKGTSYAFFTPSNS 507
++ Y + + S
Sbjct: 1039 IRADQGQYVYLADARS 1054
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQF--KEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 441
+H + +L F ++G +L+AT G+D G+K VI++ S E YI
Sbjct: 324 LHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQE 383
Query: 442 IGRTGRSKSKGTSY 483
GR GR S +Y
Sbjct: 384 TGRAGRDGSNSVAY 397
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +1
Query: 166 KSRTWCENNNFC*NQEKS*EHIKEHQEIWLPAVCMHGDKTQQERDEVLYQFKEGRASI-- 339
K+ +C++ N C + E + E+ E H + EVL +F + + I
Sbjct: 258 KTIIYCKSINACGDIY---EVLSENVESKETYAMFHSKTPDSIQKEVLGEFIKSNSKIRV 314
Query: 340 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 459
+VAT G+D+ + ++I+F P+ E Y+ IGR GR
Sbjct: 315 VVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGR 354
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFK--EGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHR 441
+H ++ +D +L FK +G +LVAT G+D G+ ++F + E +I
Sbjct: 237 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQE 296
Query: 442 IGRTGRSKSKGTSYAFF 492
G GR SY +
Sbjct: 297 TGHAGRDGKSSFSYLLY 313
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 331 ASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAF 489
A + V + + A L + + VINFD P + E+Y+H+IGR GR + G S +F
Sbjct: 380 AVVFVESKLGADML-AEAVSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISF 431
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 370 LDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSN-SLKPKIWYLFYKKL 546
L +D ++N D+ EDYIHR+GRT R+ G S F T + L +I +L KKL
Sbjct: 111 LVMDEADRILNMDF--EKEDYIHRVGRTARAGRSGRSVTFVTQYDVELYQRIEHLIAKKL 168
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 292 ERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 459
E++ +L F+ GR +L++T V GLDV V+ FD + + + GR R
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNLKSLVQSRGRASR 660
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVA 360
+HGD Q ER +VL QFK+ ILVATDVA
Sbjct: 759 LHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 268 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI- 444
+H E+D V+ +F +G + +L++T V G+DV ++ D +H++
Sbjct: 98 LHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLR 157
Query: 445 GRTGRSKSKG 474
GR GR G
Sbjct: 158 GRIGRGNLPG 167
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 462
T+ E+ EV+ +F+ A L+AT+ G D + V + P + ++ GR GR+
Sbjct: 1078 TENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRA 1137
Query: 463 KSKGTSYAFF 492
+ + ++
Sbjct: 1138 GNNAKAIIYY 1147
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 325 GRASILVATDVA-ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFT 495
G I + D A G+D ++YVI++ P S E Y GR GR K +++
Sbjct: 32 GYGMIGIGIDKAFGMGIDKGDVRYVIHYSMPKSLEGYYQECGRAGRDGKKAECILYYS 89
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 367 GLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 459
G+D+ + ++I++ P+ E Y+ IGR GR
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGR 32
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 253 LPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGL 372
+P + ++G + Q +R + +F + +L ATD+AARGL
Sbjct: 300 IPLMALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 250 WLPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSED 429
+L + M+ +E+ V + ++VAT+VA + +DGI Y S
Sbjct: 104 YLKVLPMYSGLPYEEQMLVFKRPPPNTRKVIVATNVAEASITIDGIVYESLVVTEISQAS 163
Query: 430 YIHRIGRTGRSKSKGTSYAFFT 495
R GR GR ++ G +Y +T
Sbjct: 164 AEQRAGRAGRVRA-GKAYRLYT 184
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 711 CNHCPPFGYSGQNCFRV*KSRHH 643
C CP F Y +NCFRV +S H
Sbjct: 1199 CKTCPDFDYC-ENCFRVRRSHRH 1220
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 301 EVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDY 411
++ + +G +VAT++A L VDGI +VI+ Y
Sbjct: 796 KIFQKAPDGVRKCVVATNIAETSLTVDGIMFVIDAGY 832
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 412 PNSSEDYIHRIGRTGRSKSKGTSYAFFTPSN 504
P E Y IGR GR + Y F+ P +
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGD 263
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 283 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 402
+ +E+ +V Q G +VAT+VA L + IKYV++
Sbjct: 607 SSKEQAKVFQQSPGGARLCVVATNVAETSLTIPNIKYVVD 646
>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 375 IKPSSCN---ISCYKNTSTTFLELIQNFISFLLSFIAM 271
+ P CN ++ YKN ST F+E I N S L M
Sbjct: 238 LSPGGCNCHLVTIYKNHSTLFIEAIPNIQSQRLGIFLM 275
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 331 ASILVATDVAARGLDVDGIKYVIN 402
A +++AT++A L +DGI YVI+
Sbjct: 311 AQVILATNIAETSLTIDGIIYVID 334
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 271 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVI 399
H T ERD + F++G +LVAT G+++ + +I
Sbjct: 561 HAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNLPARRVII 603
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 566 LWANHLISFL*NRYQIFGLREFEGVKKAYDVPFDFERPVLP 444
LW ++L S +Q+ E+EG K A P + P P
Sbjct: 1373 LWVHNLASMANYSFQVSAFVEYEGEKSALFYPIAQQAPAAP 1413
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,069,728
Number of Sequences: 59808
Number of extensions: 394592
Number of successful extensions: 1140
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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