Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0167.Seq
(787 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 66 5e-12
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 64 2e-11
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 62 9e-11
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 33 0.035
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 33 0.061
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 29 0.76
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 28 1.3
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 4.0
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 26 5.3
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 26 7.0
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 26 7.0
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 9.3
SPAC1002.18 |urg3||DUF1688 family protein|Schizosaccharomyces po... 25 9.3
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 25 9.3
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 9.3
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 66.1 bits (154), Expect = 5e-12
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 GYRCETHSLISQ-GYVLNIHRIPQARSGGDTPSNTVILQHGLFASSADWV-LNGPGKSLA 442
GYR E H + +Q ++L +HRI + V HGL +S WV +N +SL
Sbjct: 83 GYRVEEHLVRTQDNFILCLHRITHPKQS-QHKREVVYCHHGLMTNSELWVAVNESERSLP 141
Query: 443 FVLADAGYDVWMPNIRGNRYSR 508
FVL ++GYDVW+ N RGN+YSR
Sbjct: 142 FVLIESGYDVWLGNNRGNKYSR 163
Score = 58.4 bits (135), Expect = 1e-09
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +1
Query: 508 EHTTLKSSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLAL 687
+H T K ++WNFS ++A DIP +DYI G + K+ Y+G S G+ A L++
Sbjct: 164 KHITYKPKDEEFWNFSLDDMAMFDIPDTVDYILRETGRE-KLNYIGFSQGTAQAMAALSI 222
Query: 688 RPEYNAVLRAGLALGP 735
P+ N + + L P
Sbjct: 223 NPDLNDKVNIFIGLAP 238
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 64.1 bits (149), Expect = 2e-11
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 508 EHTTLKSSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLAL 687
+H S+ ++W+FS + AQ+DIP IDYI + G TK+ Y+G S G+ FA L++
Sbjct: 176 QHLRFDSTDKEFWDFSIDDFAQYDIPDTIDYILKTSG-QTKLTYIGFSQGTAQAFASLSI 234
Query: 688 RPEYNAVLRAGLALGPVV 741
P N + + +AL P +
Sbjct: 235 HPLLNDKINSLIALAPAI 252
Score = 60.9 bits (141), Expect = 2e-10
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +2
Query: 269 GYRCETHSLISQG-YVLNIHRIPQ---ARSGGDTPSN--TVILQHGLFASSADWVLN-GP 427
GY E H + ++ Y+L IHRI + R G P V HGL +S WV N P
Sbjct: 89 GYYVEDHLVRTEDDYILCIHRISKDSPGRIGSPHPKKLPVVYCHHGLLMNSEVWVCNVDP 148
Query: 428 GKSLAFVLADAGYDVWMPNIRGNRYSR 508
L F L + GYDVW+ N RGN+YSR
Sbjct: 149 RNCLVFDLVNKGYDVWLGNNRGNKYSR 175
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 62.1 bits (144), Expect = 9e-11
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +2
Query: 269 GYRCETHSL-ISQGYVLNIHRIPQARSGGDTPSN---TVILQHGLFASSADWVLNGPGK- 433
GY E H + + GY+L +HR+ + + G N V+ HGL +S WV N +
Sbjct: 83 GYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPPVLFIHGLMMNSESWVCNLKKED 142
Query: 434 SLAFVLADAGYDVWMPNIRGNRYS 505
++ F L + GYDVW+ N+RGN+YS
Sbjct: 143 AIPFALVEQGYDVWLGNLRGNKYS 166
Score = 50.4 bits (115), Expect = 3e-07
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +1
Query: 526 SSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLALRPEYNA 705
S + ++W+FS +A DIP+I+ YI D+ I+ +G S G+ + FA L++ E
Sbjct: 174 SQNPKFWDFSLDSIAIFDIPSIVKYILSVNSFDS-ISLVGFSQGAILAFAALSIDTELRN 232
Query: 706 VLRAGLALGPVV 741
+RA +AL P +
Sbjct: 233 SVRAFIALAPAI 244
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 33.5 bits (73), Expect = 0.035
Identities = 17/68 (25%), Positives = 38/68 (55%)
Frame = +3
Query: 18 LVALARVSVQGFDLFGSSRSLVNNFEDARNYIETQKDKVIEEWSSYMEDIKLSSSWTNFL 197
L+A +S + +L +SL+ F + R ++ ++ + +I + +Y+E ++ +S+ L
Sbjct: 500 LLAHIAISHKSVNLVPFLKSLLQMFAEDRKFLNSRGNLIIRQLCNYIEGERVYTSFAGIL 559
Query: 198 EDKENPSL 221
E +EN L
Sbjct: 560 ETEENLEL 567
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 32.7 bits (71), Expect = 0.061
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 598 YIRERKGSDTKIAYMGHSMGSTMLFAMLALRPEY 699
Y E KG +I +GHS+GST++F +L+L+P +
Sbjct: 386 YFLENKG---RIFIIGHSLGSTVVFDILSLQPTF 416
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 29.1 bits (62), Expect = 0.76
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 60 FGSSRSLVNNFEDARNYIETQKDKVIEEWS 149
FG + NNF+ YIE+Q D V+EE S
Sbjct: 122 FGEAIDNENNFDIILQYIESQYDNVLEEES 151
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 116 FDVVTSVFEVIDEASRASEQIEPL 45
FDV +FE+ID + AS++I P+
Sbjct: 664 FDVYAELFEIIDGCTFASKEISPI 687
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +1
Query: 508 EHTTLKSSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSD----TKIAYMG--HSMGSTML 669
+ TT + + H ++ DI AI+ GSD K A MG S+G ++L
Sbjct: 636 DETTRRLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGSDLTALAKDAAMGPLRSLGESLL 695
Query: 670 FA-MLALRP 693
F M ++RP
Sbjct: 696 FTKMESIRP 704
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 306 PWEMSEWVSQR*PRRVITRARSAPRRGL 223
P+E++ + R P R++T AR+A RGL
Sbjct: 414 PYELTIVSAHRTPDRMVTYARTAASRGL 441
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 102 RNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENPSLED 227
R++IET + VIE + Y+ ++ LE+ + L+D
Sbjct: 958 RDFIETIRTFVIENIAKYLASVRERRDLAPMLEEPDMDDLDD 999
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 7.0
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 111 IETQKDKVIEEWSSYME----DIKLSSSWTNFLEDKENPSLEDPDVVLSVPA*SRGAATA 278
+E K + EE S+Y +++L+ W F+E L DP + + S GA
Sbjct: 267 VEQLKQSLKEEMSNYKSSVPFEVELNDDWKFFIESTVRKYLTDPVSMPNFALLSTGA--E 324
Query: 279 VRPTRSSPR 305
V P +S R
Sbjct: 325 VLPALTSKR 333
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 519 SGVLLEYLLPLMFGIQTS*PASANTKAKDFPGPFRTQSAELANKP 385
SG+ P + I S +S+NT P P T ++NKP
Sbjct: 58 SGLSSRLSKPSLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKP 102
>SPAC1002.18 |urg3||DUF1688 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 25.4 bits (53), Expect = 9.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 341 RSGGDTPSNTVILQHGLFASSADWVLNGPGKSLAFVLAD---AGYDVWMPNIRGNRYSRS 511
RS G ++ + GLF+S+ D+V GK+L + ++ AG+ V N R+
Sbjct: 130 RSEGLAVASLRCFESGLFSSNPDFVYQVDGKALQALTSEKLGAGFQVTEQNPLAGVEGRA 189
Query: 512 TPL 520
T L
Sbjct: 190 TIL 192
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 613 KGSDTKIAYMGHSMGSTMLFAMLALRPEYNAVL 711
KGS+ ++ +G +T +FA+ ++ +Y VL
Sbjct: 140 KGSNVRLKIVGTRTDATEIFAIATMKEDYLGVL 172
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +3
Query: 54 DLFGSSRSLVNNFEDARNYIETQKDKVIEEWSSY-----MEDIKLSSSW 185
D+ + L+ +FE R +E KD+++ +S + E + L S W
Sbjct: 1214 DITSKWKDLLESFECRRLKLENNKDEILRNFSEFAKRVNTETLSLISEW 1262
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,901,607
Number of Sequences: 5004
Number of extensions: 56858
Number of successful extensions: 199
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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