Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0167.Seq
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646... 85 6e-17
08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734... 81 7e-16
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 75 6e-14
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 62 5e-10
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 40 0.003
08_02_0381 - 16518670-16518726,16518841-16518941,16519030-165192... 38 0.012
02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545 34 0.11
01_05_0146 + 18591235-18591345,18591662-18591830,18592282-185923... 34 0.11
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 33 0.19
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 30 1.8
02_05_0642 + 30576158-30576289,30576436-30576503,30577167-305774... 30 2.4
12_02_1003 - 25183468-25184010,25184295-25184551,25184795-251849... 29 3.2
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 29 3.2
11_06_0252 - 21713955-21714473 29 4.2
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 29 5.5
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 28 7.3
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 28 7.3
02_01_0762 - 5654832-5655058,5655158-5655350 28 7.3
01_06_0720 - 31482732-31482738,31482984-31483027,31483073-31483300 28 7.3
01_06_0671 - 31076463-31076610,31077060-31077202,31077758-310779... 28 7.3
02_05_0176 - 26495475-26495546,26495703-26495800,26496590-264966... 28 9.7
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 28 9.7
>04_03_0156 -
11963580-11963914,11964422-11964517,11964618-11964697,
11965250-11965290,11965402-11965548,11965922-11966035,
11968842-11968961,11969491-11969631,11969892-11970014,
11970357-11970566
Length = 468
Score = 85.0 bits (201), Expect = 6e-17
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +2
Query: 269 GYRCETHSLISQ-GYVLNIHRIPQARS-----GGDTPSNTVILQHGLFASSADWVLNGPG 430
GY CE H++ ++ GY+L++ RIP R GG V+LQHGL W++N P
Sbjct: 63 GYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLMNSPN 122
Query: 431 KSLAFVLADAGYDVWMPNIRGNRYSR 508
+SL ++LAD GYDVW+ N RG YSR
Sbjct: 123 ESLGYILADNGYDVWIANSRGTVYSR 148
Score = 58.8 bits (136), Expect = 5e-09
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +1
Query: 541 YWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLALRPEYNAVLRAG 720
YWN+SW E++ D+ A++ Y+ + G K+ Y+GHS+G+ + A L+ + + +LR+
Sbjct: 200 YWNWSWDELSSKDLSAVVQYVYSQAGQQ-KMHYVGHSLGTLIALAALSDQQQQIGMLRSA 258
Query: 721 LALGPVVYLSHIKS 762
L P+ +L + S
Sbjct: 259 GLLSPIAFLDKMSS 272
>08_02_1358 -
26372559-26372887,26373183-26373262,26373287-26373420,
26373546-26373689,26373809-26373919,26374165-26374305,
26376839-26376964,26377072-26377263
Length = 418
Score = 81.4 bits (192), Expect = 7e-16
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Frame = +2
Query: 248 ARVITRRGYRCETHSLISQ-GYVLNIHRIPQARSGGDTPSNT------VILQHGLFASSA 406
A + GY CE H + +Q GY+L + RIP+ R GG T V+LQHG+
Sbjct: 50 ATAVAPFGYPCEEHEVTTQDGYILGLQRIPRGRIGGVTGGGAAAARQPVLLQHGVLVDGM 109
Query: 407 DWVLNGPGKSLAFVLADAGYDVWMPNIRGNRYS 505
W+L P +SL ++LAD G+DVW+ N RG R+S
Sbjct: 110 TWLLGSPEESLPYILADQGFDVWIANNRGTRWS 142
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +1
Query: 511 HTTLKSSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLALR 690
H +L S YWN+SW ++ +D+PAI+DY+ G K Y+GHSMG+ + A +
Sbjct: 145 HVSLDPKSRSYWNWSWDDIVVNDMPAIVDYVCSHTGQ--KPHYVGHSMGTLVALAAFSEG 202
Query: 691 PEYNAVLRAGLALGPVVYLSHI 756
+ + A L L PV YLSHI
Sbjct: 203 RMVDKLKSAAL-LSPVAYLSHI 223
>09_01_0014 +
357398-357583,360213-360323,360520-360676,361067-361233,
362012-362122,362206-362349,362436-362476,364134-364174,
364175-364261,365402-365724
Length = 455
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 GYRCETHSLISQ-GYVLNIHRIPQARS-GGDTPSNTVILQHGLFASSADWVLNGPGKSLA 442
GY C H++ ++ G++L++ IP ++ D+ V LQHGLF W +N +SL
Sbjct: 55 GYPCTEHNVETKDGFLLSLQHIPHGKNKAADSTGPPVFLQHGLFQGGDTWFINSAEQSLG 114
Query: 443 FVLADAGYDVWMPNIRGNRYSR 508
++LAD G+DVW+ N+RG R+S+
Sbjct: 115 YILADNGFDVWIGNVRGTRWSK 136
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/74 (33%), Positives = 46/74 (62%)
Frame = +1
Query: 541 YWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLALRPEYNAVLRAG 720
+W++SW E+A++D+ A++ Y+ + +KI Y+GHS G+ M A L + PE ++ +
Sbjct: 209 FWDWSWQELAEYDLLAMLGYV--YTVTQSKILYVGHSQGTIMGLAALTM-PEIVKMISSA 265
Query: 721 LALGPVVYLSHIKS 762
L P+ YL H+ +
Sbjct: 266 ALLCPISYLDHVSA 279
>06_03_0852 -
25371461-25371783,25372080-25372159,25372472-25372554,
25372597-25372740,25372836-25372946,25373238-25373354,
25373436-25373562,25374160-25374296
Length = 373
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = +1
Query: 541 YWNFSWHEVAQHDIPAIIDYIRERKGSDTKIAYMGHSMGSTMLFAMLALRPEYNAVLRAG 720
YW +SW E+A +D+PA++ + + G KI Y+GHS+G+ M+ A + + V+R+
Sbjct: 129 YWEWSWDELASYDLPAVLQFAYDHTGE--KIHYIGHSLGTLMILAAFS-EHKLLDVVRSA 185
Query: 721 LALGPVVYLSHIKSR 765
+ L P+ YLS KS+
Sbjct: 186 VLLCPIAYLSRTKSK 200
>01_06_0343 + 28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 544 WNFSWHEVAQHDIPAIIDYIRERKGS-DTKIAYMGHSMGSTMLFAMLA 684
W+F + + D+PA ++YI+++ + D K+ +GHSMG +L+AM++
Sbjct: 995 WDFDHY--LEEDVPAAMNYIKQQSPTKDGKLLAIGHSMGGILLYAMVS 1040
>08_02_0381 -
16518670-16518726,16518841-16518941,16519030-16519200,
16519498-16519672,16519787-16519887,16520247-16520358,
16520522-16521055,16521966-16522056,16523403-16523590,
16523676-16523960
Length = 604
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +1
Query: 514 TTLKSSSTQYWNFSWHEVAQHDIPAI---IDYIRER-KGSDTKIAYMGHSMGSTMLFAML 681
T + +S W+F + + DIP ++YIR+ + D K+ +GHSMG +L+AML
Sbjct: 343 TQMNLNSEYNWDFDHY--LEEDIPTALLQVEYIRQHSRVKDGKLLAIGHSMGGILLYAML 400
Query: 682 A 684
+
Sbjct: 401 S 401
>02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545
Length = 358
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 48 GFDLFGSSRSLVNNFEDARNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENPSLED 227
G + SSRS+ ++ +D E D V+++W + + + + + + ++P D
Sbjct: 153 GSSAWSSSRSVTDSDDDTGGSPENDDDGVLDDWEAVADALSVDDN-----HNHQDPVPAD 207
Query: 228 PDVVLSVPA*SRGAATAVRPTRSSPR 305
P VV + AAT P +SS R
Sbjct: 208 PPVVPASCPVPANAATRQEPIKSSTR 233
>01_05_0146 +
18591235-18591345,18591662-18591830,18592282-18592334,
18592369-18592487,18592618-18593698
Length = 510
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 499 IFEEHTTLKSSSTQYWNFSWHEVAQHDIPAIIDYIRERKGSD 624
+ EH SS +YW +S +E D+PAI++ I + K S+
Sbjct: 138 VSREHVDKNISSYKYWKYSVNEHGTKDMPAIVEEIHKIKTSE 179
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 36 VSVQGFDLF--GSSRSLVNNFEDARNYIETQKDKVIEEWSSYMEDIKL-SSSWTNFLEDK 206
VS+QG + G S+SLVN F+ N ET+ + E W++ + + KL +SW + L
Sbjct: 199 VSMQGITIIEAGDSQSLVNYFKRRTNEEETELE---ESWATMLNEYKLQENSWLSDLYRS 255
Query: 207 EN 212
N
Sbjct: 256 RN 257
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 737 TGPSASPARSTALYSGRSASIANSIVEPIEWPMYA 633
TGP++SPA S AL + +A+ + +VEP P A
Sbjct: 61 TGPASSPAASPALQTSAAAAASLVVVEPPASPTSA 95
>02_05_0642 +
30576158-30576289,30576436-30576503,30577167-30577487,
30578318-30579146
Length = 449
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 523 LKWCAPRISVTSYVWHPDVVAGVRQHEG 440
L+W APRI V Y PD VAG+ + G
Sbjct: 36 LRWSAPRIQVREY---PDAVAGIAKGAG 60
>12_02_1003 -
25183468-25184010,25184295-25184551,25184795-25184971,
25185438-25185905,25186720-25186730,25187589-25187599
Length = 488
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 735 GAEREPRPQHRVVLRPQRQHREQHRGTHRVAHVRDLCVRALPLPDIVYD 589
GA RE R HR R H E+ RG ++ + + L PD + D
Sbjct: 139 GAIRESRSPHRSAAFIVRNHAEEVRGEGKIHLQEHIAKKILQFPDAMND 187
>04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 735 GAEREPRPQHRVVLRPQRQHREQHRGTHRVAHVRDLCVRALPLPDIVYD 589
GA RE R HR R H E+ RG ++ + + L PD + D
Sbjct: 985 GAIRESRSPHRSAAFIVRNHAEEVRGEGKIHLQEHIAKKILEFPDAMND 1033
>11_06_0252 - 21713955-21714473
Length = 172
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 419 NGPGKSLAFVLADAGYDVWMPNIR 490
+G G FVLADA D W+P +R
Sbjct: 135 DGAGGRAGFVLADAEDDRWLPEVR 158
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 735 GAEREPRPQHRVVLRPQRQHREQHRGTHRVAHVRDLCVRALPLPDIVYD 589
GA RE R HR R H E+ RG ++ + + L PD + D
Sbjct: 693 GAIRESRSPHRSAAFIVRNHVEEVRGEGKIHLQEHIAKKILQFPDAMND 741
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 425 ARSGPSRQSSQTSRAEVSRYSMECRRRFEP 336
A S PS SS +S S SM C+RR P
Sbjct: 16 ASSSPSSPSSSSSEDSSSPMSMPCKRRARP 45
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 425 ARSGPSRQSSQTSRAEVSRYSMECRRRFEP 336
A S PS SS +S S SM C+RR P
Sbjct: 16 ASSSPSSPSSSSSEDSSSPMSMPCKRRARP 45
>02_01_0762 - 5654832-5655058,5655158-5655350
Length = 139
Score = 28.3 bits (60), Expect = 7.3
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = -1
Query: 580 CRAGRPRATRNSNIESNCSLKWCAPRISVTSYVWHPDVVAGVRQHEG*GFSRPVQDPVGR 401
CRA RP A + E+ SL+ C S +S VR F+ V D G
Sbjct: 34 CRAARPAAAAEAEAEAEASLRPCLSSSSSSSERRRRRSGRRVR------FAADVVDNEGA 87
Query: 400 ---ARKQAVLKYHGIRWSVAAASSL-RYPVN 320
AR+ A + H R AAA++ R P N
Sbjct: 88 ARPARRLAAAEEHTCRGDAAAAAAAERMPAN 118
>01_06_0720 - 31482732-31482738,31482984-31483027,31483073-31483300
Length = 92
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 111 IETQKDKVIEEWSSYMEDIKLSSSWT 188
+E K+K IEEW++ E+++ + WT
Sbjct: 5 MEVHKNKWIEEWNAGRENLEFNFRWT 30
>01_06_0671 -
31076463-31076610,31077060-31077202,31077758-31077963,
31078119-31078644,31078753-31078854,31079572-31079637,
31079710-31079822,31080260-31080345,31081007-31081146
Length = 509
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 39 SVQGFD-LFGSSRSLVNNFEDARNYIETQKDKVIEEWSSYMEDIKLSSSWTNFLEDKENP 215
S Q +D L +S S ++ DAR Y + +D ED+ L SW + K N
Sbjct: 222 SDQDWDSLSSTSTSSEHSVTDARTYCSSNED----------EDLMLEQSWQKYDSVKRNA 271
Query: 216 SLEDP 230
LE+P
Sbjct: 272 ELENP 276
>02_05_0176 -
26495475-26495546,26495703-26495800,26496590-26496691,
26496944-26496999,26497082-26497245,26497925-26497995,
26498764-26498831,26499400-26499527
Length = 252
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 350 GDTPSNTVILQHGLFASSADW 412
G P + V++ HG+ S+ADW
Sbjct: 27 GPEPDHLVVMVHGIVGSAADW 47
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 260 TRRGYRCETHSLISQGYVLNIHRIPQARSGGDTPSNTVILQHGLFASSAD 409
T + R E HS G++ N+ SG +N + + HG+ + AD
Sbjct: 402 TCKRMRSENHSSWLDGFIGNVSSTSANLSGNWNTNNVLAINHGVCTTLAD 451
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,219,038
Number of Sequences: 37544
Number of extensions: 426182
Number of successful extensions: 1290
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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