Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0166.Seq
         (441 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6QLQ7 Cluster: MGC143242 protein; n=2; Bos taurus|Rep:...    35   0.89 
UniRef50_P14138 Cluster: Endothelin-3 precursor; n=21; Eutheria|...    33   2.7  
UniRef50_UPI0000DA24BD Cluster: PREDICTED: similar to Endothelin...    32   4.7  
UniRef50_Q3MU75 Cluster: Endothelin 3; n=2; Gallus gallus|Rep: E...    32   4.7  
UniRef50_P13207 Cluster: Endothelin-3 precursor; n=2; Rattus nor...    32   4.7  
UniRef50_A2Q537 Cluster: Putative uncharacterized protein; n=1; ...    32   6.3  
UniRef50_Q2M0M7 Cluster: GA10477-PA; n=1; Drosophila pseudoobscu...    32   6.3  
UniRef50_Q54GU4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  

>UniRef50_A6QLQ7 Cluster: MGC143242 protein; n=2; Bos taurus|Rep:
           MGC143242 protein - Bos taurus (Bovine)
          Length = 271

 Score = 34.7 bits (76), Expect = 0.89
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 417 IGYRAQRCLCFTRSS*HCVYRTHFSPVW 334
           + +RA+RC CFT     CVY  H   +W
Sbjct: 82  VHHRARRCTCFTYKDRECVYYCHLDIIW 109


>UniRef50_P14138 Cluster: Endothelin-3 precursor; n=21;
           Eutheria|Rep: Endothelin-3 precursor - Homo sapiens
           (Human)
          Length = 238

 Score = 33.1 bits (72), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 411 YRAQRCLCFTRSS*HCVYRTHFSPVW 334
           +R++RC CFT     CVY  H   +W
Sbjct: 92  HRSRRCTCFTYKDKECVYYCHLDIIW 117


>UniRef50_UPI0000DA24BD Cluster: PREDICTED: similar to Endothelin-3
           precursor (ET-3) (Preproendothelin-3) (PPET3); n=1;
           Rattus norvegicus|Rep: PREDICTED: similar to
           Endothelin-3 precursor (ET-3) (Preproendothelin-3)
           (PPET3) - Rattus norvegicus
          Length = 122

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 411 YRAQRCLCFTRSS*HCVYRTHFSPVW 334
           +R +RC CFT     CVY  H   +W
Sbjct: 48  HRPRRCTCFTYKDKECVYYCHLDIIW 73


>UniRef50_Q3MU75 Cluster: Endothelin 3; n=2; Gallus gallus|Rep:
           Endothelin 3 - Gallus gallus (Chicken)
          Length = 110

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 408 RAQRCLCFTRSS*HCVYRTHFSPVW 334
           RA+RC C+T     CVY  H   +W
Sbjct: 4   RARRCTCYTYKDKECVYYCHLDIIW 28


>UniRef50_P13207 Cluster: Endothelin-3 precursor; n=2; Rattus
           norvegicus|Rep: Endothelin-3 precursor - Rattus
           norvegicus (Rat)
          Length = 167

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 411 YRAQRCLCFTRSS*HCVYRTHFSPVW 334
           +R +RC CFT     CVY  H   +W
Sbjct: 48  HRPRRCTCFTYKDKECVYYCHLDIIW 73


>UniRef50_A2Q537 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 60

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 427 YRANWVPGPTLFMFHSFLLTLRLSNTFFASVAFSKIKPLRIPC 299
           Y+A  V G  L+  H     LR       +VA+SKI  L +PC
Sbjct: 13  YKATLVVGKRLYGNHYLRSALRSKGVIILNVAYSKITALLLPC 55


>UniRef50_Q2M0M7 Cluster: GA10477-PA; n=1; Drosophila
           pseudoobscura|Rep: GA10477-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 664

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +2

Query: 254 YIRYQRLYELRWPILAWNAKRLYLTERHTGEKCVR*TQCQEERVKHKQRWAR 409
           +I  +R++ +R P   W+ +R  +       +  + T C EE VK ++R+ +
Sbjct: 10  WIDGKRVHRMRMPHQRWSGRRRSINHHQPFSRWTQWTPCDEECVKRRERYCK 61


>UniRef50_Q54GU4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1032

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   PSWIEPSRNFPRHSPSARTTNNNRM*FPFNNSATF--IFTEANFLFTSKLLKEMVIYDNV 175
           PS+++ S     H  S +  NNN   F  NN   F   +T  +F+     +      +N+
Sbjct: 549 PSFLQQSPPLTHHPSSTQLVNNNLYQFDSNNQQQFQIHYTSPSFIGALASINNNNTTNNI 608

Query: 176 FYQNSGRRFIQRT*TIV 226
            + NSG      T T +
Sbjct: 609 NFDNSGNTTTTTTTTTI 625


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,141,914
Number of Sequences: 1657284
Number of extensions: 8049786
Number of successful extensions: 16097
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16097
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)