Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0166.Seq
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   3.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    20   9.1  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 17  PSRNFPRHSPSARTTNNNRM*FPFNNSA 100
           PS + P+HS S+ +T+     +P+ ++A
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAA 67


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 17  PSRNFPRHSPSARTTNNNRM*FPFNNSA 100
           PS + P+HS S+ +T+     +P+ ++A
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAA 67


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 162 ITISFNSLLVNKKLASVNINV 100
           + I FN L   + +A V INV
Sbjct: 311 LAIVFNGLFTEEDVADVPINV 331


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 400 TLFMFHSFLLT 368
           TLF +H+F LT
Sbjct: 445 TLFQYHAFYLT 455


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 32  PRHSPSARTTNNNRM 76
           PR  P ART  +NR+
Sbjct: 242 PRARPLARTCRDNRL 256


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 309 RSGFILLNATLAKNVFDRRSVR 374
           + G+  L    A  VFDRRS+R
Sbjct: 177 QGGYPRLQRCPAMLVFDRRSLR 198


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 410 TGPNVVYVSLVPPDTASIEHIFRQCGVQ*DKAASHSMLI 294
           T P     +L+PP TA++        V      SH +++
Sbjct: 128 TLPAAAAAALLPPQTAAMAAYLNAAAVAAAAQQSHRLMM 166


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 383 LVPPDTASIEHIF 345
           L+P DT +I HI+
Sbjct: 80  LIPKDTITIIHIY 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,523
Number of Sequences: 336
Number of extensions: 2029
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)