Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0166.Seq
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           26   0.52 
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   2.1  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   2.1  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   2.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   2.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   3.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   4.8  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   4.8  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   4.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           22   8.4  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 26.2 bits (55), Expect = 0.52
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTEANFLFTS 139
           WI+P+     H+P+  TT +++   P   + T ++T+     T+
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITT 265


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H+P+  TT ++    P   + T ++T+
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTD 258


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H+P+  TT ++    P   + T ++T+
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTD 258


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H+P+  TT ++    P   + T ++T+
Sbjct: 221 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTD 257


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H+P+  TT ++    P   + T ++T+
Sbjct: 222 WIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTD 258


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 368 CQEERVKHKQRWARYPIRPIVSRI 439
           C   R  ++++W R   RP+V R+
Sbjct: 774 CHTLRFANRRQWLRRFYRPVVQRV 797


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 287 NAIHIAVDT*CITLVKYIV 231
           N +HIAVD   + +V YI+
Sbjct: 887 NILHIAVDNDALDIVHYIL 905


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H P+  TT ++    P   + T ++T+
Sbjct: 221 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTD 257


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H P+  TT ++    P   + T ++T+
Sbjct: 222 WIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTD 258


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 262 PNVLH**NILLLYYRLGALNES 197
           P +L+  N+  L+YRLG L+E+
Sbjct: 450 PEILN--NVAALHYRLGNLDEA 469


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 8   WIEPSRNFPRHSPSARTTNNNRM*FPFNNSATFIFTE 118
           WI+P+     H P   TT ++    P   + T ++T+
Sbjct: 222 WIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTD 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,376
Number of Sequences: 2352
Number of extensions: 8576
Number of successful extensions: 61
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)