Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0165.Seq
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical pr...    79   3e-15
Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical pr...    69   3e-12
AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    37   0.014
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    37   0.014
Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical pr...    37   0.018
Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF025451-14|AAB71199.1|  577|Caenorhabditis elegans Hypothetical...    29   4.8  
Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical
           protein C31E10.7 protein.
          Length = 134

 Score = 79.0 bits (186), Expect = 3e-15
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +1

Query: 22  TRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIA 201
           T  E+A  + NK   ++I N V+DV  FL++HPGG EVL++ AGSD +E F +VGHS  A
Sbjct: 8   TLKEIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHSTDA 67

Query: 202 IEWRNTFKVGEIVDEEK 252
              ++ + +GE+V  E+
Sbjct: 68  RHMKDEYLIGEVVASER 84


>Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical
           protein D2023.1b protein.
          Length = 103

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = +1

Query: 4   MSVHKYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEV 183
           MS    TR+EV    +     II+ N VYDV  F++ HPGG E+L++ AG DA++ F  V
Sbjct: 1   MSDSIITRSEVNMHCSEDDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESV 60

Query: 184 GHSEIAIEWRNTFKVGEIVDEEK 252
           GHS  A      FK+G + ++E+
Sbjct: 61  GHSMCARMMLTKFKIGSLPEDER 83


>AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical
           protein W02D3.1 protein.
          Length = 141

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = +1

Query: 46  DNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFK 225
           D ++   I+I   VYDV  FL +HPGG EV+   AG DA+  F +VGHS+ AIE  N + 
Sbjct: 19  DADQSCWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDAIEMANEYL 78

Query: 226 VGEIVDEE 249
           +G++ + +
Sbjct: 79  IGQLPESD 86


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 82  VVYDVAAFLEDHPGGTEVLVDNAGSDASECFHE 180
           +VYDV  +L+ HPGG   L+  AG DA+  F++
Sbjct: 42  IVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 74


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 82  VVYDVAAFLEDHPGGTEVLVDNAGSDASECFHE 180
           +VYDV  +L+ HPGG   L+  AG DA+  F++
Sbjct: 78  IVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 110


>Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical
           protein C25A1.5 protein.
          Length = 316

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 46  DNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASE 168
           D  K  L+ +D   YD+A F   HPGG +VL   AG +  E
Sbjct: 6   DEKKPLLVQLDGQYYDIADFAPKHPGGAKVLNRLAGEEIGE 46


>Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical
           protein F58B4.2 protein.
          Length = 89

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 7   SVHKYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDAS 165
           ++ +YTR++V     +    ++  + VY++  +   HPGG  +L   AG D +
Sbjct: 8   NLKEYTRSQVEQHCTHDDLWLLFRDKVYNMTPYFNQHPGGLAIL-RYAGKDVT 59


>Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical
           protein H13N06.4b protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 19  YTRAEVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLV-DNAGSDASECFHEVGHS 192
           Y + EV     +   + +   + VYDV  F+  HPGG ++L+   A  D     +    +
Sbjct: 82  YKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKT 141

Query: 193 EIAIEWRNTFKVGEI 237
           +  +E    +++G++
Sbjct: 142 KEVLEILEGYRIGKL 156


>Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical
           protein H13N06.4a protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +1

Query: 19  YTRAEVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLV-DNAGSDASECFHEVGHS 192
           Y + EV     +   + +   + VYDV  F+  HPGG ++L+   A  D     +    +
Sbjct: 82  YKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKT 141

Query: 193 EIAIEWRNTFKVGEI 237
           +  +E    +++G++
Sbjct: 142 KEVLEILEGYRIGKL 156


>Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical
           protein T14G10.6 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 421 NYLRPPSTRILVGYKDGPHLVGL*MGYQEKWL 516
           NY+R     ++VGY+D P L  L    QE W+
Sbjct: 144 NYIRNLLNDVVVGYRDDPDLQLLIDSMQETWM 175


>AF025451-14|AAB71199.1|  577|Caenorhabditis elegans Hypothetical
           protein C24H12.1 protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 181 VGHSEIAIEWRNTFKVGEIVDEEKLK 258
           V +S I +EWR+T  +G   D+E+ K
Sbjct: 472 VKYSPIGVEWRHTVDIGGFKDDEQRK 497


>Z46787-1|CAA86739.2|  360|Caenorhabditis elegans Hypothetical
           protein C16C10.1 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 533 CLSCDVRKPCLLVQSP 580
           C+SC+VRKPC   Q P
Sbjct: 88  CVSCEVRKPCEWYQRP 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,597,238
Number of Sequences: 27780
Number of extensions: 274286
Number of successful extensions: 716
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)