Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0163.Seq
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 5e-39
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 125 4e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 119 3e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 105 5e-23
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 77 1e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 59 4e-09
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 46 3e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 36 0.044
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.2
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.6
SB_39029| Best HMM Match : ig (HMM E-Value=6e-10) 30 2.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 30 2.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.9
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_34472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.6
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 28 6.6
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 6.6
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 28 8.8
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_29032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12) 28 8.8
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 8.8
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 8.8
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 8.8
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (448), Expect = 6e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIV+DSGDGVS P
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVSHTVP 165
Score = 159 bits (387), Expect = 2e-39
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +3
Query: 579 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
D + + I ERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVA 194
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIV+DSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 157 bits (380), Expect = 1e-38
Identities = 72/75 (96%), Positives = 74/75 (98%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (308), Expect = 6e-30
Identities = 59/60 (98%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 135
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIV+DSGDGV+ P
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 157 bits (380), Expect = 1e-38
Identities = 72/73 (98%), Positives = 73/73 (100%)
Frame = +2
Query: 35 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 214
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 215 RGILTLKYPIEHG 253
RGILTLKYPIEHG
Sbjct: 62 RGILTLKYPIEHG 74
Score = 125 bits (301), Expect = 4e-29
Identities = 59/60 (98%), Positives = 59/60 (98%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVA
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVA 220
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA
Sbjct: 76 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 135
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIV+DSGDGV+ P
Sbjct: 136 IQAVLSLYASGRTTGIVMDSGDGVTHTVP 164
Score = 155 bits (376), Expect = 3e-38
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +2
Query: 35 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 214
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 215 RGILTLKYPIEHG 253
RGILTLKYPIEHG
Sbjct: 62 RGILTLKYPIEHG 74
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 220
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIV+DSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGIVMDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 7e-41
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 158 bits (383), Expect = 5e-39
Identities = 72/73 (98%), Positives = 73/73 (100%)
Frame = +2
Query: 35 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 214
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 215 RGILTLKYPIEHG 253
RGILTLKYPIEHG
Sbjct: 62 RGILTLKYPIEHG 74
Score = 128 bits (308), Expect = 6e-30
Identities = 59/60 (98%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 124 HTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 183
Score = 83.8 bits (198), Expect = 1e-16
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +1
Query: 373 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+ P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVP 127
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTF 300
+TNWDDMEKI TF
Sbjct: 76 VTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 125 bits (301), Expect = 4e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
H VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 40 HNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVA 99
Score = 76.2 bits (179), Expect = 3e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +1
Query: 394 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVS P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVP 43
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 119 bits (286), Expect = 3e-27
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 280 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 459
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 460 ASGRTTGIVLDSGDGVSTPYP 522
ASGRTTG V D GDGVS P
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVP 2209
Score = 99.1 bits (236), Expect = 3e-21
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A
Sbjct: 2206 HTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCA 2265
Query: 690 STSSR 704
R
Sbjct: 2266 MDYER 2270
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 53 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 154
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (255), Expect = 2e-23
Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 432
+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+
Sbjct: 79 VRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYI 138
Query: 433 AIQAVLSLYASGRTTGIVLDSGDGVS 510
AIQAVL+LYA G TG+V+DSGDGV+
Sbjct: 139 AIQAVLTLYAQGLLTGVVIDSGDGVT 164
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 686
H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV
Sbjct: 165 HICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 220
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 221 ILTLKYPIEHG 253
+L + YP+++G
Sbjct: 67 MLEVNYPMDNG 77
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 105 bits (251), Expect = 5e-23
Identities = 45/65 (69%), Positives = 57/65 (87%)
Frame = +1
Query: 328 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 508 STPYP 522
S P
Sbjct: 186 SHSVP 190
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/55 (54%), Positives = 45/55 (81%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 674
H+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 187 HSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/95 (35%), Positives = 59/95 (62%)
Frame = +1
Query: 238 PHRARYITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 417
P + I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 418 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
PA ++ +VL+ +A+GR+ G+V+DSG ++ P
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVP 97
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 516 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 614
VP+++GY L AI+R LAG +T ++ E
Sbjct: 96 VPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 53 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 154
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 504 CLHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLC 680
C IYEG+ L H + L++ G LT+ L + L + RG++FT+++ +IV DIKEK+C
Sbjct: 789 CTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKIC 848
Query: 681 YVA 689
Y++
Sbjct: 849 YLS 851
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 23 FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 193
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 194 GDEAQSKRGILTL 232
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 439 QAVLSLYASGRTTGIVLDSG 498
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 151 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 35
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 686
H +P+ EGY + I + +AGRD+T ++ ++L ER E + IKE+ Y+
Sbjct: 74 HVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYI 132
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 283 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 462
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 463 SGRTTGIV 486
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 35.5 bits (78), Expect = 0.044
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 238 PHRARYITNWDDMEKIWHHTFYNELRVAPEEHPVLL 345
P R + +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 60 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 206
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 128
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 370 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 486
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 128
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_39029| Best HMM Match : ig (HMM E-Value=6e-10)
Length = 439
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -1
Query: 360 EGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDVPCSMGYFRVRIPLLLWASSPT*ES 181
EGG+ + G Q + +VP +L IP+ ++P ++ ++R R L W +
Sbjct: 320 EGGWTYFEMQIAQGRLQHGHDVLVPVMLENIPLNELPSTLQHYRSRRTWLEWFNEDVRPH 379
Query: 180 FW 175
FW
Sbjct: 380 FW 381
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +1
Query: 433 AIQAVLSLYASGRTTGIVLDSGDGVSTPYPSTKVTLCPTP 552
AIQ V A RTTGI LD G + Y TK PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELD-GRRIRVDYSVTKRAHTPTP 247
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 15 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 128
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 348 GEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDVP 250
GE +GV L DTQ+ E + D+ +++ G+VP
Sbjct: 1152 GETNGVFLFTDTQIKEESFLEDINNLLNAGEVP 1184
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = -1
Query: 402 KHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDVP 250
+ DL L V GV+G ++ V L DTQ++VE + D+ +++ G+VP
Sbjct: 916 REDLKKLYDVA-GVKG----ENTVFLFTDTQIVVEEFLEDINNILNSGEVP 961
>SB_34472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -2
Query: 653 DFPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY----GVETPSPESS 486
D P+ GG PL LH +G V ++ + Q V+ Y ++ PE +
Sbjct: 17 DLPVQWGGSSEPPLATGLHRCMGTAIQFHVFGKETLVQDVSLGQAYFDLKSLDLDEPERT 76
Query: 485 TIPV 474
++P+
Sbjct: 77 SLPL 80
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 358 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 486
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 9 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 134
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 128
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 149 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGTSPT 265
H GV VG+G ++ DE Q+ + + + HGT+ T
Sbjct: 124 HGGVKVGIGLAIAHAVDEVQASMESIKWPFLVLHGTADT 162
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 223
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 224 LTLKY--PIEHG 253
L Y P + G
Sbjct: 285 SALFYVLPFQKG 296
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 235 VPHRARYITNWDDMEKIWHHTFYNE 309
+P + ++ NWD ++IW +TF E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 360 EGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDVP 250
+ G + V L DTQ + EG + D+ +++ G+VP
Sbjct: 2117 QAGVDNKPTVFLFNDTQALEEGFLEDVNNILSSGEVP 2153
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 445 VLSLYASGRTTGIVLDSGDGVSTPYPSTKVTLCPTPSSV 561
V++ A G+T G LDSG G P S + +P S+
Sbjct: 14 VMAKLAYGQTPGATLDSGRGCLVPLDSYRPLKLGSPQSI 52
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 156 PWWRGRPTMDGKTARGASSPAKPALHMPEP 67
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_29032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 445 VLSLYASGRTTGIVLDSGDGVSTPYPSTKVTLCPTPSSV 561
V++ A G+T G LDSG G P S + +P S+
Sbjct: 14 VMAKLAYGQTPGATLDSGRGCLVPLDSYRPLKLGSPQSI 52
>SB_7575| Best HMM Match : Exo_endo_phos (HMM E-Value=3.4e-12)
Length = 548
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 445 VLSLYASGRTTGIVLDSGDGVSTPYPSTKVTLCPTPSSV 561
V++ A G+T G LDSG G P S + +P S+
Sbjct: 14 VMAKLAYGQTPGATLDSGRGCLVPLDSYRPLKLGSPQSI 52
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 24 SRCATTMLLR-L*STMAPACARPVSPAT 104
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 24 SRCATTMLLR-L*STMAPACARPVSPAT 104
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 24 SRCATTMLLR-L*STMAPACARPVSPAT 104
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,574,049
Number of Sequences: 59808
Number of extensions: 484909
Number of successful extensions: 1763
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -