SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0163.Seq
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         184   3e-48
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         184   3e-48
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         184   3e-48
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          177   2e-46
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.77 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.0  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   1.8  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   1.8  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   3.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   3.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.1  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        24   4.1  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   9.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  184 bits (447), Expect = 3e-48
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = +1

Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
           +TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77  VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136

Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
           IQAVLSLYASGRTTGIVLDSGDGVS   P
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVSHTVP 165



 Score =  161 bits (390), Expect = 3e-41
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +2

Query: 29  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 209 SKRGILTLKYPIEHG 253
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score =  128 bits (310), Expect = 1e-31
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = +3

Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
           HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 689 LDFEQEMATA 718
           LDFEQEMATA
Sbjct: 222 LDFEQEMATA 231


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  184 bits (447), Expect = 3e-48
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = +1

Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
           +TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77  VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136

Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
           IQAVLSLYASGRTTGIVLDSGDGVS   P
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVSHTVP 165



 Score =  161 bits (390), Expect = 3e-41
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +2

Query: 29  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 209 SKRGILTLKYPIEHG 253
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score =  128 bits (310), Expect = 1e-31
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = +3

Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
           HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 689 LDFEQEMATA 718
           LDFEQEMATA
Sbjct: 222 LDFEQEMATA 231


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  184 bits (447), Expect = 3e-48
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = +1

Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
           +TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77  VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136

Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
           IQAVLSLYASGRTTGIVLDSGDGVS   P
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVSHTVP 165



 Score =  161 bits (390), Expect = 3e-41
 Identities = 73/75 (97%), Positives = 75/75 (100%)
 Frame = +2

Query: 29  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 209 SKRGILTLKYPIEHG 253
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score =  128 bits (310), Expect = 1e-31
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = +3

Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
           HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 689 LDFEQEMATA 718
           LDFEQEMATA
Sbjct: 222 LDFEQEMATA 231


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  177 bits (432), Expect = 2e-46
 Identities = 81/89 (91%), Positives = 85/89 (95%)
 Frame = +1

Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
           ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKMTQIMFETF +PA+YVA
Sbjct: 77  ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPAVYVA 136

Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
           IQAVLSLYASGRTTG+VLDSGDGVS   P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVSHTVP 165



 Score =  157 bits (382), Expect = 2e-40
 Identities = 71/75 (94%), Positives = 72/75 (96%)
 Frame = +2

Query: 29  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
           MCDDD  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 209 SKRGILTLKYPIEHG 253
           SKRGILTLKYPIEHG
Sbjct: 61  SKRGILTLKYPIEHG 75



 Score =  128 bits (308), Expect = 2e-31
 Identities = 59/60 (98%), Positives = 60/60 (100%)
 Frame = +3

Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
           HTVPIYEGYALPHAILR+DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 21/84 (25%), Positives = 32/84 (38%)
 Frame = -2

Query: 575 TSQVQTEDGVGQSVTFVDGYGVETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 396
           TS   T+   GQ   FVD Y      PE S  PV      + +T          L   ++
Sbjct: 47  TSTTNTQQQNGQE--FVDDYDSYDDQPEPSDEPVFEKNVSTVATCSRTAPFCYTLWTFDI 104

Query: 395 IWVIFSLLALGLRGASVSSTGCSS 324
           +  +  ++  G  G++     CSS
Sbjct: 105 VKNVTRVVVQGCWGSNDDQESCSS 128


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 142 PSPPGRDGRYGPERL--LRG*RGPE 210
           P P GRDG +GP  L   +G RG E
Sbjct: 346 PGPRGRDGNFGPVGLPGQKGDRGSE 370


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -1

Query: 225 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 128 TTRFPTTTTTSAPTTPSQWT 147


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -1

Query: 225 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 128 TTRFPTTTTTSAPTTPSQWT 147


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTTFPTTTTTSAPTTPSQWT 148



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -1

Query: 219 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTTFPTTTTTSAPTTPSQWT 148



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -1

Query: 219 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTTFPTTTTTSAPTTPSQWT 148



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -1

Query: 219 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTTFPTTTTTSAPTTPSQWT 148


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTTFPTTTTTSAPTTPSQWT 148


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 STPYPSTKVTLCPTPSSVWT 567
           +T +P+T  T  PT  S WT
Sbjct: 129 TTKFPTTTTTSAPTTPSQWT 148



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -1

Query: 225 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 88
           + P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 131 KFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 6   HKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSS 125
           H H+  S  +TT +    ++  PAC    S  +T  A ++
Sbjct: 18  HHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAA 57



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 69  APACARPVSPATTRPAPSS 125
           APA A+P      +PAPSS
Sbjct: 411 APATAKPTPKPIPKPAPSS 429


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 6   HKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSS 125
           H H+  S  +TT +    ++  PAC    S  +T  A ++
Sbjct: 18  HHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAA 57



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 69  APACARPVSPATTRPAPSS 125
           APA A+P      +PAPSS
Sbjct: 411 APATAKPTPKPIPKPAPSS 429


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +3

Query: 3   QHKHTQSSRCATTMLLR----L*STMAPACARPVSPATTRPAPSSRPS 134
           Q ++T   R A  + LR       T AP+  RP  PA    APS  P+
Sbjct: 32  QARYTPMVRTAQRVALRHSFETDGTPAPSTVRPRPPAPPTNAPSQLPA 79


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 692 RGDIAELLLDVTNDFPLSGGGERVT-PLGEDLHEVVGQVATS 570
           R D   LLL + N   L GG   +    G  ++E+  QV  S
Sbjct: 267 RSDFMNLLLQIKNTGSLDGGDVPIKGAAGLTMNELAAQVFVS 308


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 19/74 (25%), Positives = 30/74 (40%)
 Frame = -2

Query: 644 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVETPSPESSTIPVVRP 465
           +S G  + + LG  L  V G     +++  +G  Q+V FVD   +            V  
Sbjct: 626 VSAGCPQGSMLGPRLWNV-GYDGVLRLELPEGA-QAVGFVDDLAIVAAGTTPEHAAAVAE 683

Query: 464 EAYSESTAWMATYM 423
           EA     AWM  ++
Sbjct: 684 EAVERVHAWMRHHL 697


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,776
Number of Sequences: 2352
Number of extensions: 15932
Number of successful extensions: 80
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -