Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0163.Seq
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 182 2e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 182 2e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 182 2e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 182 2e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 182 2e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 182 2e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 177 6e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 164 6e-41
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 164 6e-41
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 162 2e-40
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 162 2e-40
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 135 3e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 95 6e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 87 1e-17
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 33 0.21
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 33 0.21
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.63
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 182 bits (444), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIVLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVP 165
Score = 164 bits (398), Expect = 6e-41
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (444), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIVLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGIVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 73/75 (97%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 33 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 92
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 93 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 121
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 118 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 177
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 161 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 253
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 31
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 63 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 122
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 123 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 151
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 148 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 207
Score = 123 bits (297), Expect = 1e-28
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = +2
Query: 83 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 61
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 182 bits (443), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVA
Sbjct: 77 VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 136
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTG+VLDSGDGV+ P
Sbjct: 137 IQAVLSLYASGRTTGVVLDSGDGVTHTVP 165
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
Score = 128 bits (310), Expect = 3e-30
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 221
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 177 bits (431), Expect = 6e-45
Identities = 79/89 (88%), Positives = 85/89 (95%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV
Sbjct: 76 VTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVN 135
Query: 436 IQAVLSLYASGRTTGIVLDSGDGVSTPYP 522
IQAVLSLYASGRTTGIVLD+GDGV+ P
Sbjct: 136 IQAVLSLYASGRTTGIVLDTGDGVTHTVP 164
Score = 153 bits (371), Expect = 1e-37
Identities = 69/73 (94%), Positives = 73/73 (100%)
Frame = +2
Query: 35 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 214
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 215 RGILTLKYPIEHG 253
RGILTLKYPIEHG
Sbjct: 62 RGILTLKYPIEHG 74
Score = 124 bits (299), Expect = 6e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA
Sbjct: 161 HTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVA 220
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 164 bits (398), Expect = 6e-41
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 164 bits (398), Expect = 6e-41
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 162 bits (394), Expect = 2e-40
Identities = 74/75 (98%), Positives = 75/75 (100%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 208
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 209 SKRGILTLKYPIEHG 253
SKRGILTLKYPIEHG
Sbjct: 61 SKRGILTLKYPIEHG 75
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 135 bits (327), Expect = 3e-32
Identities = 61/101 (60%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +1
Query: 232 EVPHRARYITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 408
E P + NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 409 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSTPYPSTK 531
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+ P K
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVK 171
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +2
Query: 35 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 205
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 206 QSKRGILTLKYPIEHG 253
+S RG+ +++YP+EHG
Sbjct: 62 ESNRGLFSIEYPMEHG 77
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+A
Sbjct: 165 HAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLA 224
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 110 bits (264), Expect = 1e-24
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 432
+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YV
Sbjct: 79 VRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYV 138
Query: 433 AIQAVLSLYASGRTTGIVLDSGDGVS 510
A+QAVL+LYA G TG+V+DSGDGV+
Sbjct: 139 AVQAVLTLYAQGLLTGVVVDSGDGVT 164
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 689
H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A
Sbjct: 165 HICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIA 224
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +2
Query: 53 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 226
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 227 TLKYPIEHG 253
+ YP+++G
Sbjct: 69 DINYPMDNG 77
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 94.7 bits (225), Expect = 6e-20
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 8/103 (7%)
Frame = +1
Query: 238 PHRARYITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 417
P R + +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 418 PAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSTPYP 522
P +Y+A+QAVL+L AS + TG+V+DSGDGV+ P
Sbjct: 144 PGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIP 186
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +3
Query: 510 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 686
H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV
Sbjct: 183 HCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Frame = +2
Query: 29 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 172
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 173 GQKDSYVGDEAQSKRGI-LTLKYPIEHG 253
D ++GDEA S T+KYPI HG
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHG 88
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +1
Query: 256 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 435
I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F PA Y++
Sbjct: 99 IEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLS 158
Query: 436 IQAVLSLYASGRTTGIVLDSG 498
VLS +A GRT G+++DSG
Sbjct: 159 KNVVLSCFAQGRTHGLMVDSG 179
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 38 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 136
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +3
Query: 516 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 617
VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 307 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 486
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 487 LDSGDGVS 510
+D G+ V+
Sbjct: 326 VDIGERVN 333
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 507 LHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKL 677
++ VP+ +GY + AI + + + D L L+ Y+F + E+ I+R E+
Sbjct: 332 VNIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQT 391
Query: 678 CYV 686
YV
Sbjct: 392 TYV 394
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +1
Query: 238 PHRARYITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 417
P Y+ NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 418 PAMYVAIQAVLSLYASGRTT----GIVLDSG 498
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +1
Query: 238 PHRARYITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 417
P Y+ NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 418 PAMYVAIQAVLSLYASGRTT----GIVLDSG 498
++ + L S + +V+DSG
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 506 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 411
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 60 STMAPACARPVSPATTRPAPSSRP 131
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 650 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 516
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 51 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 158
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 174 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 64
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 83 KAGFAGDDAPRAVFPSIVGRPRHQG 157
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 60 STMAPACARPVSPATTRPAPSSRPSWVALATRA 158
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,936,022
Number of Sequences: 27780
Number of extensions: 344265
Number of successful extensions: 1574
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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