Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0162.Seq
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 69 3e-12
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 49 3e-06
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 43 2e-04
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 37 0.014
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 36 0.032
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 36 0.032
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 36 0.032
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 36 0.032
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 36 0.032
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 35 0.055
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 35 0.055
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 35 0.073
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 35 0.073
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 34 0.097
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 29 3.6
Z68753-2|CAD56618.1| 480|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2
Query: 284 AERRRTDPLVTLSSLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDN 463
A R R DP V +SS+L D++N ++ + F+ PVN K V DYY I+ P+ LQ I+
Sbjct: 1450 AHRARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKKVVDYYNIIKNPISLQEIKKK 1509
Query: 464 LRQKHYQSREEFLAD 508
+ ++ Y R++FL D
Sbjct: 1510 ISEQSYLLRKDFLDD 1524
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 523 ENSTLYNGPTSSLTVAAQRMLQRCVXXXXXXXXXXXXXXXQINPLLDDNDQVALSFIFEN 702
+NS +YNG + LT+ AQ+MLQ QINPLLD ND + S++
Sbjct: 1530 DNSRMYNGDNNILTLTAQQMLQLAGKRMIEREQKFIGLEKQINPLLDTNDLIGFSYLLGE 1589
Query: 703 LLTTKLKIMPES 738
++ K+K +P+S
Sbjct: 1590 IV-QKMKNIPKS 1600
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +2
Query: 299 TDPLVTLSSLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKH 478
T+ L+ S LL +++ M+++P F V+ K + YY +S PMDL + + +
Sbjct: 1577 TNDLIGFSYLLGEIVQKMKNIPKSALFHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQE 1636
Query: 479 YQSREEFLADS 511
Y+S +EFL D+
Sbjct: 1637 YKSIDEFLKDA 1647
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 3 GHMRTNKACPLY 38
GHM+TN+ CPLY
Sbjct: 1275 GHMKTNRNCPLY 1286
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +2
Query: 284 AERRRTDPLVTLSSLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDN 463
A R R DP V +SS+L D++N ++ + F+ PVN K V DYY I+ P+ LQ I+
Sbjct: 1450 AHRARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKKVVDYYNIIKNPISLQEIKKK 1509
Query: 464 LRQKHYQSREEFLAD 508
+ ++ Y R++FL D
Sbjct: 1510 ISEQSYLLRKDFLDD 1524
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 523 ENSTLYNGPTSSLTVAAQRMLQRCVXXXXXXXXXXXXXXXQINPLLDDNDQVALSFIFEN 702
+NS +YNG + LT+ AQ+MLQ QINPLLD ND + S++
Sbjct: 1530 DNSRMYNGDNNILTLTAQQMLQLAGKRMIEREQKFIGLEKQINPLLDTNDLIGFSYLLGE 1589
Query: 703 LLTTKLKIMPES 738
++ K+K +P+S
Sbjct: 1590 IV-QKMKNIPKS 1600
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +2
Query: 299 TDPLVTLSSLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKH 478
T+ L+ S LL +++ M+++P F V+ K + YY +S PMDL + + +
Sbjct: 1577 TNDLIGFSYLLGEIVQKMKNIPKSALFHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQE 1636
Query: 479 YQSREEFLADS 511
Y+S +EFL D+
Sbjct: 1637 YKSIDEFLKDA 1647
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 3 GHMRTNKACPLY 38
GHM+TN+ CPLY
Sbjct: 1275 GHMKTNRNCPLY 1286
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 374 PFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
PFL PVN KLV Y I+S+PMDL+TIR + Y++ E+F D
Sbjct: 1283 PFLEPVNPKLVPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAED 1327
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 323 SLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFL 502
+L+E +L PFL PV+ K V DYY ++ RPM+L+T+ + ++Q+ Y E
Sbjct: 1327 TLIETLLKEAMRQECSWPFLQPVDSKEVPDYYDVIKRPMNLRTMMNKIKQRIYNKPIEVR 1386
Query: 503 AD 508
D
Sbjct: 1387 ND 1388
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 365 DVQPFLFPVNHKL--VADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
D PF PV+ KL + DY+ I+ RPMDL+T+ L YQ+ +F D
Sbjct: 885 DAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDD 934
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 365 DVQPFLFPVNHKL--VADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
D PF PV+ KL + DY+ I+ RPMDL+T+ L YQ+ +F D
Sbjct: 874 DAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDD 923
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 326 LLED-VLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQS 487
L++D +L + Q F FPV + DY I+ PMDLQTIR+N+ Y S
Sbjct: 154 LMQDHILRKLVEKDPEQYFAFPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYAS 208
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 326 LLED-VLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQS 487
L++D +L + Q F FPV + DY I+ PMDLQTIR+N+ Y S
Sbjct: 154 LMQDHILRKLVEKDPEQYFAFPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYAS 208
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/65 (30%), Positives = 37/65 (56%)
Frame = +2
Query: 314 TLSSLLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSRE 493
+L S + +L + + PF PV+ K V +YY + P+D +T+++ L++K Y +
Sbjct: 650 SLDSKIGAILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPIDFKTMQEKLKRKAYTHQH 709
Query: 494 EFLAD 508
F+AD
Sbjct: 710 LFIAD 714
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 320 SSLLEDVLNHMRHLPDVQPFLFPVNH-KL-VADYYRIVSRPMDLQTIRDNLRQKHYQSRE 493
S LL ++ + +++ Q F PV+ KL + DY +++ PMDLQTI+ L K Y E
Sbjct: 561 SKLLNEI-HSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPE 619
Query: 494 EFLAD 508
EF+ D
Sbjct: 620 EFVHD 624
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 320 SSLLEDVLNHMRHLPDVQPFLFPVNH-KL-VADYYRIVSRPMDLQTIRDNLRQKHYQSRE 493
S LL ++ + +++ Q F PV+ KL + DY +++ PMDLQTI+ L K Y E
Sbjct: 561 SKLLNEI-HSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPE 619
Query: 494 EFLAD 508
EF+ D
Sbjct: 620 EFVHD 624
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 374 PFLFPVNHKLVA--DYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
PF PV+ L+ DY+ ++ +PMD+ TIR L + Y + EF D
Sbjct: 140 PFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEFKED 186
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 890 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 935
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 937 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 982
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 984
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 890 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 935
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 937 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 982
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 984
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 377 FLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLADSI 514
F+ PV+ DYY I+ P+ +Q I + L Y ++F+AD I
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLI 984
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 287 ERRRTDPLVT--LSSLLEDVLNHMRHLPDVQPFLFPV--NHKLVADYYRIVSRPMDLQTI 454
++++TDP + ++ +L+ +L + ++ +F K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 455 RDNLRQKHYQSREEFLAD 508
+ Y EE D
Sbjct: 1234 NKKIETGRYTVMEELNDD 1251
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 287 ERRRTDPLVT--LSSLLEDVLNHMRHLPDVQPFLFPV--NHKLVADYYRIVSRPMDLQTI 454
++++TDP + ++ +L+ +L + ++ +F K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 455 RDNLRQKHYQSREEFLAD 508
+ Y EE D
Sbjct: 1234 NKKIETGRYTVMEELNDD 1251
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 287 ERRRTDPLVT--LSSLLEDVLNHMRHLPDVQPFLFPV--NHKLVADYYRIVSRPMDLQTI 454
++++TDP + ++ +L+ +L + ++ +F K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 455 RDNLRQKHYQSREEFLAD 508
+ Y EE D
Sbjct: 1234 NKKIETGRYTVMEELNDD 1251
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 LSSLLEDVLNHMRHLPDVQPFLFPVNHKLVAD--YYRIVSRPMDLQTIRDNLRQKHYQSR 490
L ++ VL V PF PV+ + Y+ V+RPMDL+TI + L+ +Y
Sbjct: 44 LDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCA 103
Query: 491 EEFLAD 508
+E + D
Sbjct: 104 QECIDD 109
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 374 PFLFPVNHKLVA--DYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
PF PV+ + + DY++I+ PMDL++++ + Y+ +F D
Sbjct: 284 PFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHD 330
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 34.7 bits (76), Expect = 0.073
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 LSSLLEDVLNHMRHLPDVQPFLFPVNHKLVAD--YYRIVSRPMDLQTIRDNLRQKHYQSR 490
L ++ VL V PF PV+ + Y+ V+RPMDL+TI + L+ +Y
Sbjct: 44 LDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCA 103
Query: 491 EEFLAD 508
+E + D
Sbjct: 104 QECIDD 109
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 374 PFLFPVNHKLVA--DYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
PF PV+ + + DY++I+ PMDL++++ + Y+ +F D
Sbjct: 284 PFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHD 330
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 LLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLA 505
LLE +L H P F PV+ DY + + +PMDL TI + + Y +F+
Sbjct: 261 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 316
Query: 506 D 508
D
Sbjct: 317 D 317
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 LLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLA 505
LLE +L H P F PV+ DY + + +PMDL TI + + Y +F+
Sbjct: 2114 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 2169
Query: 506 D 508
D
Sbjct: 2170 D 2170
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 LLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLA 505
LLE +L H P F PV+ DY + + +PMDL TI + + Y +F+
Sbjct: 540 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 595
Query: 506 D 508
D
Sbjct: 596 D 596
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 LLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLA 505
LLE +L H P F PV+ DY + + +PMDL TI + + Y +F+
Sbjct: 358 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 413
Query: 506 D 508
D
Sbjct: 414 D 414
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 326 LLEDVLNHMRHLPDVQPFLFPVNHKLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLA 505
LLE +L H P F PV+ DY + + +PMDL TI + + Y +F+
Sbjct: 253 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 308
Query: 506 D 508
D
Sbjct: 309 D 309
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 YYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
YY +++P+DL+TI N K Y + +E D
Sbjct: 230 YYEKIAKPIDLKTIAQNGVNKKYSTMKELKDD 261
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 398 KLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
K +YY+I+ P+D++TIR + Y + + D
Sbjct: 567 KQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMIND 603
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 413 YYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
YY ++ +PMD+ I+ L + Y + + ++D
Sbjct: 749 YYDVIKKPMDMMRIKHKLENRQYVTLLDVVSD 780
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 YYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
YY +++P+DL+TI N K Y + +E D
Sbjct: 230 YYEKIAKPIDLKTIAQNGVNKKYSTMKELKDD 261
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 398 KLVADYYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
K +YY+I+ P+D++TIR + Y + + D
Sbjct: 567 KQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMIND 603
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +2
Query: 413 YYRIVSRPMDLQTIRDNLRQKHYQSREEFLAD 508
YY ++ +PMD+ I+ L + Y + + ++D
Sbjct: 749 YYDVIKKPMDMMRIKHKLENRQYVTLLDVVSD 780
>Z68753-2|CAD56618.1| 480|Caenorhabditis elegans Hypothetical
protein ZC518.1b protein.
Length = 480
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 646 INPLLDDNDQVALSFIFENLLTTKLKIMPESW 741
+NPL +D+D + ++I + L T L I+ W
Sbjct: 294 LNPLGEDDDDLECNYIIDKNLITGLSIVDTMW 325
>Z68753-1|CAA92989.1| 499|Caenorhabditis elegans Hypothetical
protein ZC518.1a protein.
Length = 499
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 646 INPLLDDNDQVALSFIFENLLTTKLKIMPESW 741
+NPL +D+D + ++I + L T L I+ W
Sbjct: 294 LNPLGEDDDDLECNYIIDKNLITGLSIVDTMW 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,030
Number of Sequences: 27780
Number of extensions: 278466
Number of successful extensions: 719
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -