Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0161.Seq
         (757 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K5Q9 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_A0DDZ4 Cluster: Chromosome undetermined scaffold_47, wh...    34   3.3  
UniRef50_Q14515 Cluster: SPARC-like protein 1 precursor; n=30; E...    33   7.6  

>UniRef50_A5K5Q9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1308

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +1

Query: 571 IIYETVEPPGYSVPVSCGVKVKPGFEKYYVLSSFQCSSGCMY 696
           ++++ ++  G  +P+ C   VK  + KY +LS F+C+S C +
Sbjct: 152 LLFQELQKRGRKIPIICHEYVK-SYSKYVLLSYFKCTSSCNF 192


>UniRef50_A0DDZ4 Cluster: Chromosome undetermined scaffold_47, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_47,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 398

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 741 DMITFLIQAHNSIIRIHTSTRTLKAR 664
           D+ITFL Q H   +R+HT  R LK R
Sbjct: 311 DLITFLFQCHGQELRVHTINRELKQR 336


>UniRef50_Q14515 Cluster: SPARC-like protein 1 precursor; n=30;
           Euteleostomi|Rep: SPARC-like protein 1 precursor - Homo
           sapiens (Human)
          Length = 664

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 288 SKNIQIHVSRCEQPQQQGCTGLEICENEQGTNVIYKSGRVLRNPMQGGPATGDDH 124
           + N+  H+   E   Q+G TGLE   N + T     S  +L  P   G  T  +H
Sbjct: 281 ASNVNKHIQETEWQSQEGKTGLEAISNHKETEEKTVSEALLMEPTDDGNTTPRNH 335


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,501,580
Number of Sequences: 1657284
Number of extensions: 14818782
Number of successful extensions: 35312
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35304
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)