Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0160.Seq
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022807-1|AAH22807.1| 261|Homo sapiens transmembrane protein 1... 150 4e-36
AK172843-1|BAD18807.1| 221|Homo sapiens protein ( Homo sapiens ... 150 4e-36
AF157321-1|AAF67487.1| 261|Homo sapiens 30 kDa protein protein. 150 4e-36
AK222953-1|BAD96673.1| 219|Homo sapiens 30 kDa protein variant ... 149 5e-36
BC007438-1|AAH07438.1| 257|Homo sapiens transmembrane protein 1... 32 1.3
AB097008-1|BAC77361.1| 257|Homo sapiens putative NFkB activatin... 32 1.3
X15606-1|CAA33630.1| 275|Homo sapiens ICAM-2 preprotein (AA -21... 30 5.3
M32334-1|AAA36035.1| 275|Homo sapiens intercellular adhesion mo... 30 5.3
CR541834-1|CAG46633.1| 275|Homo sapiens ICAM2 protein. 30 5.3
CR541812-1|CAG46611.1| 275|Homo sapiens ICAM2 protein. 30 5.3
BC003097-1|AAH03097.1| 275|Homo sapiens intercellular adhesion ... 30 5.3
AK223219-1|BAD96939.1| 275|Homo sapiens intercellular adhesion ... 30 5.3
AF340053-1|AAQ14910.1| 275|Homo sapiens intercellular adhesion ... 30 5.3
AF340052-1|AAQ14909.1| 275|Homo sapiens intercellular adhesion ... 30 5.3
AB209878-1|BAD93115.1| 344|Homo sapiens intercellular adhesion ... 30 5.3
>BC022807-1|AAH22807.1| 261|Homo sapiens transmembrane protein 111
protein.
Length = 261
Score = 150 bits (363), Expect = 4e-36
Identities = 68/112 (60%), Positives = 81/112 (72%)
Frame = +1
Query: 250 VARENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVL 429
V RENGKY+P+QSF R+++FNN E G+FK KR +PMTDP M+TDM+KGN+TNVL
Sbjct: 60 VLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVL 119
Query: 430 PMIVIGGWINWMFSGFLTTKVPFPLTRDSSRCFSAALS*RIWDASWGSSASW 585
PMI+IGGWIN FSGF+TTKVPFPLT + DASW SSASW
Sbjct: 120 PMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASW 171
Score = 89.4 bits (212), Expect = 8e-18
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +2
Query: 83 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLER 262
PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+ QV DSQV+IR+R+L
Sbjct: 4 PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63
Query: 263 TG 268
G
Sbjct: 64 NG 65
>AK172843-1|BAD18807.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ24004 fis, clone KAT01090, highly similar to
Homo sapiens 30 kDa protein (LOC55831). ).
Length = 221
Score = 150 bits (363), Expect = 4e-36
Identities = 68/112 (60%), Positives = 81/112 (72%)
Frame = +1
Query: 250 VARENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVL 429
V RENGKY+P+QSF R+++FNN E G+FK KR +PMTDP M+TDM+KGN+TNVL
Sbjct: 60 VLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVL 119
Query: 430 PMIVIGGWINWMFSGFLTTKVPFPLTRDSSRCFSAALS*RIWDASWGSSASW 585
PMI+IGGWIN FSGF+TTKVPFPLT + DASW SSASW
Sbjct: 120 PMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASW 171
Score = 88.6 bits (210), Expect = 1e-17
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = +2
Query: 83 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLER 262
PELLLD NIR WV LPIVIITF VG +RHYVS++L S KK+ QV DSQV+IR+R+L
Sbjct: 4 PELLLDSNIRLWVVLPIVIITFFVGTIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63
Query: 263 TG 268
G
Sbjct: 64 NG 65
>AF157321-1|AAF67487.1| 261|Homo sapiens 30 kDa protein protein.
Length = 261
Score = 150 bits (363), Expect = 4e-36
Identities = 68/112 (60%), Positives = 81/112 (72%)
Frame = +1
Query: 250 VARENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVL 429
V RENGKY+P+QSF R+++FNN E G+FK KR +PMTDP M+TDM+KGN+TNVL
Sbjct: 60 VLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVL 119
Query: 430 PMIVIGGWINWMFSGFLTTKVPFPLTRDSSRCFSAALS*RIWDASWGSSASW 585
PMI+IGGWIN FSGF+TTKVPFPLT + DASW SSASW
Sbjct: 120 PMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASW 171
Score = 89.4 bits (212), Expect = 8e-18
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +2
Query: 83 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLER 262
PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+ QV DSQV+IR+R+L
Sbjct: 4 PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63
Query: 263 TG 268
G
Sbjct: 64 NG 65
>AK222953-1|BAD96673.1| 219|Homo sapiens 30 kDa protein variant
protein.
Length = 219
Score = 149 bits (362), Expect = 5e-36
Identities = 67/112 (59%), Positives = 81/112 (72%)
Frame = +1
Query: 250 VARENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVL 429
+ RENGKY+P+QSF R+++FNN E G+FK KR +PMTDP M+TDM+KGN+TNVL
Sbjct: 60 ILRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVL 119
Query: 430 PMIVIGGWINWMFSGFLTTKVPFPLTRDSSRCFSAALS*RIWDASWGSSASW 585
PMI+IGGWIN FSGF+TTKVPFPLT + DASW SSASW
Sbjct: 120 PMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASW 171
Score = 89.8 bits (213), Expect = 6e-18
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +2
Query: 83 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLER 262
PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+ QV DSQV+IR+R+L
Sbjct: 4 PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRILRE 63
Query: 263 TG 268
G
Sbjct: 64 NG 65
>BC007438-1|AAH07438.1| 257|Homo sapiens transmembrane protein 101
protein.
Length = 257
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 242 RARLLERTGSIYLGSHLLCVATGLTMRKQAISKYRKEL 355
R+R L+ TG ++LG +L+CVA L K+ Y L
Sbjct: 136 RSRSLQSTGQVFLGIYLICVAYSLQHSKEDRLAYLNHL 173
>AB097008-1|BAC77361.1| 257|Homo sapiens putative NFkB activating
protein protein.
Length = 257
Score = 32.3 bits (70), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 242 RARLLERTGSIYLGSHLLCVATGLTMRKQAISKYRKEL 355
R+R L+ TG ++LG +L+CVA L K+ Y L
Sbjct: 136 RSRSLQSTGQVFLGIYLICVAYSLQHSKEDRLAYLNHL 173
>X15606-1|CAA33630.1| 275|Homo sapiens ICAM-2 preprotein (AA -21 to
254) protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>M32334-1|AAA36035.1| 275|Homo sapiens intercellular adhesion
molecule 2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>CR541834-1|CAG46633.1| 275|Homo sapiens ICAM2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>CR541812-1|CAG46611.1| 275|Homo sapiens ICAM2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>BC003097-1|AAH03097.1| 275|Homo sapiens intercellular adhesion
molecule 2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>AK223219-1|BAD96939.1| 275|Homo sapiens intercellular adhesion
molecule 2 precursor variant protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>AF340053-1|AAQ14910.1| 275|Homo sapiens intercellular adhesion
molecule 2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>AF340052-1|AAQ14909.1| 275|Homo sapiens intercellular adhesion
molecule 2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 208 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 260
>AB209878-1|BAD93115.1| 344|Homo sapiens intercellular adhesion
molecule 2 precursor variant protein.
Length = 344
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 188 SSQKKIELIQ-VQDSQVMIRARLLERTGSIYLGSHLLCVATGLTMRKQAISKY 343
S+ K +E+ + V DSQ++I ++ S+++ S LLC G +R+Q + Y
Sbjct: 277 SAPKMLEIYEPVSDSQMVIIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTY 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,195,963
Number of Sequences: 237096
Number of extensions: 1727670
Number of successful extensions: 3026
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3018
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -