Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0159.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.7  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 465 HPVNPSSDDNHRQDICQI 412
           H +N   +DN + ++C+I
Sbjct: 237 HSINLLEEDNQKPNVCRI 254


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 579 SWEFLNVFGLRTIYALVLGENNAADQ 656
           S E  N++GL+ +YA V+      D+
Sbjct: 263 SEEVANIWGLKKVYAPVVDGEFLTDE 288


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 579 SWEFLNVFGLRTIYALVLGENNAADQ 656
           S E  N++GL+ +YA V+      D+
Sbjct: 261 SEEVANIWGLKKVYAPVVDGEFLTDE 286


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 579 SWEFLNVFGLRTIYALVLGENNAADQ 656
           S E  N++GL+ +YA V+      D+
Sbjct: 263 SEEVANIWGLKKVYAPVVDGEFLTDE 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,087
Number of Sequences: 336
Number of extensions: 3859
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)