Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0159.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118958-1|AAM50818.1|  247|Drosophila melanogaster LD37839p pro...   138   5e-33
AE014134-1941|AAF53000.1|  247|Drosophila melanogaster CG6750-PA...   138   5e-33
BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p pro...    30   2.6  
AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA...    30   2.6  

>AY118958-1|AAM50818.1|  247|Drosophila melanogaster LD37839p
           protein.
          Length = 247

 Score =  138 bits (335), Expect = 5e-33
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = +1

Query: 256 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPM 435
           RENGKYL  QSF+MR+++FNNEETGYFK QKRA  +QN      M+TDM+KGN  NVLPM
Sbjct: 60  RENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPM 116

Query: 436 IVIGGWINWMFSGFLTTKVPFPLT 507
           +VIGGWINWMFSGF+TTKVPFPLT
Sbjct: 117 VVIGGWINWMFSGFVTTKVPFPLT 140



 Score =  102 bits (245), Expect = 4e-22
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = +2

Query: 80  MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLE 259
           M ELL+DP+IR WVFLPIV+ITFLVGIVRHYVS+++S+QKK E+ Q+QDSQ MIRARLL 
Sbjct: 1   MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60

Query: 260 RTGSIYLGS 286
             G  YL +
Sbjct: 61  ENGK-YLSA 68



 Score =  100 bits (239), Expect = 2e-21
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +3

Query: 495 FSADSRFKPMLQRGVELAYLDASWGSSASWEFLNVFGLRTIYALVLGENNAADQSKIMQE 674
           F    RFKPMLQRGVELA LDA+W SSASW FLNVFGLR+IY LVLGENN ADQ++   +
Sbjct: 137 FPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQAD 196

Query: 675 QMSGAAM 695
            M+GAAM
Sbjct: 197 AMTGAAM 203


>AE014134-1941|AAF53000.1|  247|Drosophila melanogaster CG6750-PA
           protein.
          Length = 247

 Score =  138 bits (335), Expect = 5e-33
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = +1

Query: 256 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPM 435
           RENGKYL  QSF+MR+++FNNEETGYFK QKRA  +QN      M+TDM+KGN  NVLPM
Sbjct: 60  RENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPM 116

Query: 436 IVIGGWINWMFSGFLTTKVPFPLT 507
           +VIGGWINWMFSGF+TTKVPFPLT
Sbjct: 117 VVIGGWINWMFSGFVTTKVPFPLT 140



 Score =  102 bits (245), Expect = 4e-22
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = +2

Query: 80  MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLE 259
           M ELL+DP+IR WVFLPIV+ITFLVGIVRHYVS+++S+QKK E+ Q+QDSQ MIRARLL 
Sbjct: 1   MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60

Query: 260 RTGSIYLGS 286
             G  YL +
Sbjct: 61  ENGK-YLSA 68



 Score =  100 bits (239), Expect = 2e-21
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +3

Query: 495 FSADSRFKPMLQRGVELAYLDASWGSSASWEFLNVFGLRTIYALVLGENNAADQSKIMQE 674
           F    RFKPMLQRGVELA LDA+W SSASW FLNVFGLR+IY LVLGENN ADQ++   +
Sbjct: 137 FPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSIYTLVLGENNHADQTQAQAD 196

Query: 675 QMSGAAM 695
            M+GAAM
Sbjct: 197 AMTGAAM 203


>BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 256 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNP 372
           R  G Y  RQ F  + H+ +NEET YF+    A     P
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFRSHNNAYHQPKP 332


>AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 256 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNP 372
           R  G Y  RQ F  + H+ +NEET YF+    A     P
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFRSHNNAYHQPKP 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,986,142
Number of Sequences: 53049
Number of extensions: 684913
Number of successful extensions: 1563
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)