Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0158.Seq
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 37 0.003
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 35 0.008
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 33 0.026
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.034
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.034
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 33 0.045
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 32 0.059
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 32 0.078
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 31 0.10
SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.14
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 31 0.14
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.18
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 31 0.18
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.24
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 29 0.42
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 29 0.42
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 0.42
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.55
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.55
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.3
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 1.7
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 1.7
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 1.7
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 27 1.7
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 27 1.7
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 2.2
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 27 2.2
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 3.9
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 3.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 3.9
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 5.1
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 5.1
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 6.8
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 25 6.8
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 25 9.0
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 25 9.0
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 36.7 bits (81), Expect = 0.003
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +2
Query: 230 RPAAADAGEMERS--QANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEET 403
R + +A E +++ A LEA ++ L+EQ ++L E E++Q EL + LEET
Sbjct: 99 RAPSQNAYEADKNALDAKFLEAHKILENLDEQTRKL---SERTEKQQDELDIALDDLEET 155
Query: 404 KNMEAAERAKLEEEIRTKQEGSTTHSNRSRAQGLGTRRLQDEVEEARRNRTK 559
N + EI + T S + Q L +++ EEA +N ++
Sbjct: 156 LNTLKRTSENRDREIARISQDVYTMSTITLPQSL--EQIKKSQEEALQNLSR 205
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 35.1 bits (77), Expect = 0.008
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 200 ACREEATRVRRPAAADAGEME--RSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGEL 373
A RE+ + R+ + E E R Q L+ + ++ KQL+ AKEE ER++ E
Sbjct: 559 AYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEE-ERQRRE- 616
Query: 374 HDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRSRAQGLGTRRLQDEVEEARRNR 553
+RL E +A E AK +EE R K+E + + Q R+ ++E ++ +
Sbjct: 617 ---AERLAEQAAQKALE-AKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKERE 672
Query: 554 TK 559
K
Sbjct: 673 KK 674
Score = 31.5 bits (68), Expect = 0.10
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 242 ADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAA 421
AD +M R Q L ++ R LEE+ ++ + KEE ERR+ EL + + E+ + + A
Sbjct: 682 ADREKMAREQR--LREEEEKRILEERKRREKLDKEEEERRRRELLE-KESEEKERRLREA 738
Query: 422 ERAKLEEEIRTKQ--EGSTTHS 481
+ A +TK+ +G TT S
Sbjct: 739 KIAAFFAPNQTKEGSDGCTTSS 760
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 33.5 bits (73), Expect = 0.026
Identities = 21/90 (23%), Positives = 43/90 (47%)
Frame = +2
Query: 212 EATRVRRPAAADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQR 391
EA R AA A E E ++ + + R +EE+ + + AKE +R E + +R
Sbjct: 788 EAIREAEEEAARAAEEEANRELHEQEEAQKRAIEERTRAAREAKEREQREMAEKLERQRR 847
Query: 392 LEETKNMEAAERAKLEEEIRTKQEGSTTHS 481
+++ ++ E + + + R G+++ S
Sbjct: 848 IQQERDEEISRKLAEKAAARRANIGASSPS 877
Score = 27.1 bits (57), Expect = 2.2
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +2
Query: 179 VGDSRA*ACREEATRVRRPAAADAGEMERSQANLLEAQ--DMIRRLEEQLKQLQAAKEEL 352
+ D R A +E + + DA E ER + + E + + IR EE+ + AA+EE
Sbjct: 751 IDDERDKAYQEAYAKAKN--VIDA-ERERQRKEIFEQKLAEAIREAEEEAAR--AAEEEA 805
Query: 353 ERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRSRAQGLGTRRLQDEV 532
R ELH+ E A++ +EE R +E + RR+Q E
Sbjct: 806 NR---ELHEQ----------EEAQKRAIEERTRAAREAKEREQREMAEKLERQRRIQQER 852
Query: 533 EE 538
+E
Sbjct: 853 DE 854
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 33.1 bits (72), Expect = 0.034
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +2
Query: 290 QDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGS 469
++ R++ + L++ Q K E+ER + E + ET+ E + A LEEE +
Sbjct: 142 EEFERQITDLLEEQQQLKLEIERLEAETE---RANSETEQYEKQKEA-LEEEYEELRNEC 197
Query: 470 TTHSNRSRAQGLGTRRLQDEVEEARRNRTK 559
H + A+ R LQD EE R TK
Sbjct: 198 LKHDPQLDAE---IRTLQDTFEEVERTLTK 224
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.1 bits (72), Expect = 0.034
Identities = 18/85 (21%), Positives = 40/85 (47%)
Frame = +2
Query: 305 RLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSN 484
+L LK L+A K+ L ELH + +L +E ++ + L +++ +QE +
Sbjct: 903 QLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKE 962
Query: 485 RSRAQGLGTRRLQDEVEEARRNRTK 559
+ +Q ++ +++E +K
Sbjct: 963 ENMSQSQAITSVKSKLDETLSKSSK 987
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/85 (16%), Positives = 38/85 (44%)
Frame = +2
Query: 290 QDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGS 469
+ ++R LK + + +LE EL + + + ++ + E+E ++ +
Sbjct: 349 EKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSI 408
Query: 470 TTHSNRSRAQGLGTRRLQDEVEEAR 544
+ N ++ +++ ++EEAR
Sbjct: 409 DEYQNNLSSKDKMVKQVSSQLEEAR 433
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 257 MERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKL 436
++ S+ N L + + E + L+ KEE ++ EL ++ + N + L
Sbjct: 1346 LKDSEKNFLRKE---AEMTENIHSLEEGKEETKKEIAELSSRLEDNQLATNKLKNQLDHL 1402
Query: 437 EEEIRTKQE 463
+EIR K++
Sbjct: 1403 NQEIRLKED 1411
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 308 LEEQLK-QLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSN 484
L E +K QLQ AKE+++ + + ++ + +KN + + IR E +N
Sbjct: 1496 LMENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNN 1555
Query: 485 RSRAQGLGTRRLQDEVE 535
+ +RL E E
Sbjct: 1556 LLAEEKSAVKRLSTEKE 1572
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 32.7 bits (71), Expect = 0.045
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +2
Query: 257 MERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAER--- 427
++R + N LE+Q++ E+++ L+ E E+ EL +L++ KN E R
Sbjct: 766 LKRREVNSLESQELSVLDTEKIQTLERRISETEK---ELESYAGQLQDAKNEEHRIRDNQ 822
Query: 428 AKLEEEIRTKQEGSTTHSNRSRAQGLGTRRLQDE 529
+ EEIR +E T + R + RL+DE
Sbjct: 823 RPVIEEIRIYREKIQTETQRLSSLQTELSRLRDE 856
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 32.3 bits (70), Expect = 0.059
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +2
Query: 263 RSQANLLEAQDMIRRLEEQLKQLQAAKEELER-RQGELHDMMQRLE-ETKNMEAAERAKL 436
R Q + QD++ + + L++ + A+EEL+R RQ + LE E + +AA+ A+L
Sbjct: 97 RIQPDEKTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAAQDAEL 156
Query: 437 EEEIRTKQEGSTTHSNRSRAQGLGTRRLQDEVEEA 541
E R ++ S+ R+ L ++ ++E E A
Sbjct: 157 ASE-RARE----AQSSIERSASLREKQAREEAERA 186
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 31.9 bits (69), Expect = 0.078
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 311 EEQLKQLQAAKEELERRQGE---LHDMMQRLEETKNMEAAERAKLEEEIRTKQE 463
EE LKQ + + E + + M+R+EE + M AA+RAK EE R ++E
Sbjct: 924 EEFLKQFEVTDYKAEDLNWDDIIPEEEMERIEEEERMLAAQRAKEEERERREEE 977
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.5 bits (68), Expect = 0.10
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +2
Query: 254 EMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAK 433
E ER LLE + + + + + K+EL ++ + + ++ +EE K+ E +R
Sbjct: 109 EQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRL 168
Query: 434 LEEEIRTKQEGSTTHSNRSR 493
+E+I K++ R +
Sbjct: 169 KQEQIDAKRKEEEAREKRMK 188
>SPBC1685.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 325
Score = 31.1 bits (67), Expect = 0.14
Identities = 20/83 (24%), Positives = 43/83 (51%)
Frame = +2
Query: 242 ADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAA 421
A E+ +++ + + I L+E+++ LQ E+L + + +++RL+ N+E
Sbjct: 127 ASLAEVHKAE-EISNLKTSITHLDEEIQILQ---EKLAIVTNQRNTLVKRLQTYDNLEKK 182
Query: 422 ERAKLEEEIRTKQEGSTTHSNRS 490
+ +E+ + T QE H+N S
Sbjct: 183 KALSMEDRLLTLQEQYDAHANVS 205
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 31.1 bits (67), Expect = 0.14
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +2
Query: 206 REEATRVRRPAAADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMM 385
+ EA ++ R E+E + L E + +R+ + + + + + LER + DM
Sbjct: 78 KTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERER---DDME 134
Query: 386 QRLEETKNMEAAERAKLEE 442
Q+LEE + +A+L+E
Sbjct: 135 QKLEEMTDKYTKVKAELDE 153
Score = 30.3 bits (65), Expect = 0.24
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = +2
Query: 188 SRA*ACREEATRVRRPAAADAGEMERSQANLLEAQDMIRRLEEQLKQ--LQAAKEELERR 361
+RA A + V + E E A+ + LEE+ KQ L+A E++++
Sbjct: 20 ARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKT 79
Query: 362 QGE-LHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRSRAQGLGTRR--LQDEV 532
+ E L ++ LEE +E ++ E + +Q R Q L R ++ ++
Sbjct: 80 EAEQLSRKVELLEE--ELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKL 137
Query: 533 EEARRNRTK 559
EE TK
Sbjct: 138 EEMTDKYTK 146
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.7 bits (66), Expect = 0.18
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 290 QDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRT-KQEG 466
++ + LE +KQL K+ELE + D + +L+ TKN E AK++E + K
Sbjct: 1075 EEKVNYLEADVKQLPKLKKELESLNDK--DQLYQLQATKNKEL--EAKVKECLNNIKSLT 1130
Query: 467 STTHSNRSRAQGLGTRRLQ-DEVEEARRN 550
+ + Q L L+ E++E N
Sbjct: 1131 KELENKEEKCQNLSDASLKYIELQEIHEN 1159
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 30.7 bits (66), Expect = 0.18
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 245 DAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETK-NMEAA 421
D +M + N +E +I RLE +K +++ EELER E ++++++TK N E A
Sbjct: 162 DVLQMTNRRVNSIE-HIIIPRLENTIKYIESELEELER---EDFTRLKKVQKTKENAEKA 217
Query: 422 ERAKLEEEIRTKQEGSTT 475
+ EE Q GS T
Sbjct: 218 DSVTKEEH----QGGSNT 231
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.24
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 323 KQLQAAKEELERRQGELHDMMQRLEETKNMEAA------ERAKLEEEIRTKQEGSTTHSN 484
+QL ELE + E H + ++L + A LEE TK+E S+T
Sbjct: 1402 QQLSQKTSELEAKVAECHQLNEQLNKPSATPTATTQSEPSTVSLEEFNSTKEELSSTQRK 1461
Query: 485 RSRAQGLGTRRLQDEVEEARRNRTK 559
S + ++E+E+ R+N K
Sbjct: 1462 LSEIMDI-LNTTKEELEKVRQNSNK 1485
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/79 (21%), Positives = 38/79 (48%)
Frame = +2
Query: 257 MERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKL 436
+ER++ + E ++ I L+ L + KE+LE +L +++ +N +
Sbjct: 1246 LERNEEVITELREKIETLKTDLANFRLNKEQLE---SQLQTEKAAVKKLENSNEEYKRHN 1302
Query: 437 EEEIRTKQEGSTTHSNRSR 493
+E + + ++T S+ SR
Sbjct: 1303 QEILLSLNSSTSTSSDASR 1321
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 305 RLEEQLKQLQAAKEELERRQGELHDM-MQRLEETKNMEAAERAKLEEEIRTKQE 463
R E++++++AA++ +E + + + + E KN+E R ++EE+R +E
Sbjct: 319 RSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEE 372
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 29.5 bits (63), Expect = 0.42
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 308 LEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQE 463
L K L EELER Q + +Q E+ K E+ +LE+E R K+E
Sbjct: 65 LNSDWKGLSFDNEELERLQHQKMLQIQAEEQRKIELQQEQERLEQERRQKEE 116
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.5 bits (63), Expect = 0.42
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 206 REEATRVRRPAAADAGEMERSQANLLEAQDMIR-RLEEQLKQLQAAKEELERRQGELHDM 382
REE + E + L E+ + LEEQ + + EEL Q +L+D+
Sbjct: 612 REEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDL 671
Query: 383 MQRLEETKNMEAAERAKLEEEIRTKQEG 466
L+ TK + ++EEE++ +EG
Sbjct: 672 RIELDYTK----SNCKQMEEEMQVLREG 695
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 29.1 bits (62), Expect = 0.55
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 308 LEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQ 460
L++ +QLQ EELE ++ +L + RL++ + L ++++TKQ
Sbjct: 499 LDDHNRQLQMNVEELEGKKADLTSKINRLDKDFVKLNTTYSLLTDQVKTKQ 549
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.1 bits (62), Expect = 0.55
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 254 EMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAK 433
E +++ L +A+ + RL + Q+Q + +L D + L++T + AER +
Sbjct: 412 ENQKNIKKLNDAESLKSRLLQSRTQMQTELDSYITSNSQLKDEITSLKQTVSESEAERKR 471
Query: 434 LEEEIRTKQ 460
L + KQ
Sbjct: 472 LFSSAQEKQ 480
Score = 28.7 bits (61), Expect = 0.73
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 311 EEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRS 490
E + K+L ++ +E + + E + + L+E N + + EE+++ K+E T
Sbjct: 466 EAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLL 525
Query: 491 RAQGLGTRRLQDEVEEARRNR 553
R Q +++L+ VE+ R
Sbjct: 526 REQTQDSQKLRLLVEQLELER 546
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 284 EAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQE 463
E Q+ +R+LEE++ ++ K LE Q + QR+E+ K R +L+E K+E
Sbjct: 606 EEQEEMRKLEEKI---ESTKYGLETIQTSGKTIKQRIEQKKTRLMILREELQELDAIKEE 662
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Frame = +2
Query: 311 EEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAER-----AKLEEE------IRTK 457
++ +K++ ++ L+ + L ++ +E KN+ AER +LE E R
Sbjct: 815 DKLMKKIYHCEQSLKEKTNSLETLVSEKKELKNLLDAERRSKKAIQLELENLSSQAFRRN 874
Query: 458 QEGSTTHSNRSRAQGL-----GTRRLQDEVEE 538
GS++ S RS+++ L +RL+++VEE
Sbjct: 875 LSGSSSPSERSQSRELKLLQASEKRLKEQVEE 906
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 347 ELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRS 490
ELE + ELH+ +RL+ K++ E L E +++ + S ++
Sbjct: 368 ELETKLKELHEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKN 415
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.5 bits (58), Expect = 1.7
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +2
Query: 209 EEATRVRRPAAADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQ 388
EE +R AA + + + ++EEQLK L +++L++ L
Sbjct: 405 EEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKS 464
Query: 389 RLEETKNMEAAERAKLEEEI-----RTKQEGSTTHSNRSRAQGLGTRRLQDEVEEARR 547
E + + + KL EI R +QE + R QG T + + +EE ++
Sbjct: 465 EAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQG-KTEGISNAIEEKQK 521
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 263 RSQANLLEAQDM--IRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKL 436
RS+A+ L + + ++ L +K +K+ L G+L ++ L E+ + ERA L
Sbjct: 387 RSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSSLDTERADL 446
Query: 437 EEEIRTKQEGSTTHSNRSRAQGLGTRRLQDEVEE 538
+I K E + + + L L + +E
Sbjct: 447 LAKINEKIESLELEKHDQQKKRLTYSELFHKTQE 480
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 248 AGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELE-RRQGELHDMMQRLEETKNMEAAE 424
+GE +R + Q++ R EE+ +++Q KE+ + +++ E+ + E+T+NM ++
Sbjct: 63 SGERKRKFSKKSHLQELYERSEEK-RRIQQEKEDAKVQKRLEIEKKQKDREQTRNM-LSK 120
Query: 425 RAKLEEEIRTKQ 460
+ K + I Q
Sbjct: 121 KTKRGQPIMRNQ 132
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +2
Query: 254 EMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAK 433
E S + L D RRLEE +Q+Q ++ ++H + +EE + +A+
Sbjct: 130 EAALSTTSSLLDDDFARRLEEIDRQVQEFEKSSSDMDVQIHTHKREIEEDDDNTSADVPL 189
Query: 434 LEEEIRTKQEGSTTHSNRS 490
L+ +K + ST + ++S
Sbjct: 190 LK---HSKSDHSTLYHSKS 205
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/69 (20%), Positives = 37/69 (53%)
Frame = +2
Query: 254 EMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAK 433
+++ + ++++ QD++ ++ + L+A +EE RR E ++ + A +AK
Sbjct: 447 DIDALRPSIIQLQDIVTEANKEFQLLRAEREE-RRRYIETSSRELEDKDAEIAAQAYKAK 505
Query: 434 LEEEIRTKQ 460
++++ KQ
Sbjct: 506 VDQDTSAKQ 514
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 2.2
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 284 EAQDMIRRLEEQLKQLQAAK-EELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQ 460
+A ++ RR E Q +++ K EE ++ L D+ + EET +E + LE E++
Sbjct: 23 QADELRRRRETQQIEIRKQKREENLNKRRNLVDVQEPAEETIPLEQDKENDLELELQLPD 82
Query: 461 EGSTTHSNRSRAQGLGTRRLQ 523
+S+ AQ T + +
Sbjct: 83 LLKALYSDDIEAQIQATAKFR 103
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 293 DMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQE 463
D I+++EE KQ+ A++ E + ++ ++ E KN+ + +L+ + TK +
Sbjct: 1278 DCIQKIEELEKQIDVARDVAEDTKSLGKELQNKINE-KNLAEQKVEELQSQSFTKNK 1333
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +2
Query: 305 RLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSN 484
R E+Q L+A ++ +ERR+ E ++ + E + + AE K+ +K S T +N
Sbjct: 506 RAEQQQIMLEARQKAIERRRNEEEELARSRERAR--KKAEEIKISS---SKMNSSPTITN 560
Query: 485 RSRAQGLGTRRLQ 523
+ +++++
Sbjct: 561 ERSSNVESSKKVE 573
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 3.9
Identities = 20/99 (20%), Positives = 39/99 (39%)
Frame = +2
Query: 185 DSRA*ACREEATRVRRPAAADAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQ 364
D++ REE ++ ++ + E + + + E +L Q +E+ +
Sbjct: 1024 DTKVQELREENASLKDQCRTYESQLASLVSKYSETESELNKKEAELVIFQ---KEITEYR 1080
Query: 365 GELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHS 481
+LH Q E+T N+ + L + STT S
Sbjct: 1081 DQLHKAFQNPEKTHNINDVKSGPLNSDENIYSTSSTTLS 1119
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.8 bits (54), Expect = 5.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 284 EAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKN--MEAAERAKLEEE 445
E D+ +RLE+ + + KEE E Q L ++ L E+++ E E+ K+++E
Sbjct: 124 EHLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKE 179
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +2
Query: 335 AAKEELERRQGELHDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHSNRSRAQGLGTR 514
AA + L+RR + D + +KN++ + +LE++I + + N R L
Sbjct: 514 AAVQYLQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLE 573
Query: 515 RLQDEVEE 538
+ + + E+
Sbjct: 574 KSKKKNED 581
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 374 HDMMQRLEETKNMEAAERAKLEEEIRTKQEGSTTHS 481
H + R E ++ +A +R + E E+RT+ EG+T +
Sbjct: 479 HRAVARARE-EDADALDRKEEERELRTRGEGATVET 513
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 25.4 bits (53), Expect = 6.8
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 245 DAGEMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAE 424
D + E L ++ ++LEE+ + L LE+R L +L +T N +E
Sbjct: 76 DKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSE 135
Query: 425 RAKLEEE--IRTKQEGSTTHSNRS 490
+L + I K+ T N S
Sbjct: 136 FLQLLRKIAINVKEGRQLTTENSS 159
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 285 SSKLACDRSISPASAAAGLRTLVASSRHAHARLSPT 178
S K C S S + G L+ +R+AH+ L+PT
Sbjct: 141 SYKAGCSDSCSVTVSGTG--ELIGPTRNAHSNLTPT 174
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.0 bits (52), Expect = 9.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +2
Query: 254 EMERSQANLLEAQDMIRRLEEQLKQLQAAKEELERRQGELHDMMQRLEETKNMEAAERA 430
E E Q+ +L+ + + + + L+ ELE + E+HD ++ +T +EA+ A
Sbjct: 724 ENENLQSQILQISEELVDYRSRCEALEYGNYELETKLIEMHDRVEM--QTNVIEASASA 780
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,607,259
Number of Sequences: 5004
Number of extensions: 23681
Number of successful extensions: 195
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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