Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0157.Seq
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +1

Query: 304 NLQQLNKLDQLYISENGITVIE--NLENQIKLQTLDLAVNRITVIEN 438
           N+  L  LD   +S N +  ++     N  KLQ LD + NRI+ I N
Sbjct: 270 NMPHLQVLD---LSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPN 313


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 248 PQGFVFCLFYFYPSIIV 198
           P  F+ C++YFY + I+
Sbjct: 139 PLFFLLCIYYFYCAFII 155



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 239 FVFCLFYFYPSIIV 198
           F+ C++YFY ++I+
Sbjct: 281 FLLCIYYFYCALII 294



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 239 FVFCLFYFYPSIIV 198
           F+ C++YFY + I+
Sbjct: 208 FLPCIYYFYSAFII 221



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -1

Query: 532 NLLFCCKYLSMTI-LLF 485
           +LLFCC ++  T+ LLF
Sbjct: 265 HLLFCCAFIIFTMHLLF 281


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 267 YFQVVKSSRFCILLILFLPKYNCLRVL 187
           YFQ   +   C+++ +F  KY  + +L
Sbjct: 153 YFQFYYTYFLCVIVCIFRGKYRNINLL 179


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 307 LQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
           ++ +NKL +  +    +++I N ENQ     + L V  + V
Sbjct: 103 IEFINKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYVFV 143


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 469  WLNDNQITEWSSIDICNKTTN 531
            W N+  I +W     C+ T+N
Sbjct: 1313 WDNNKNICDWPEKATCDGTSN 1333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,102
Number of Sequences: 336
Number of extensions: 4298
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)