Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0157.Seq
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 61 1e-09
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 61 1e-09
SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20) 60 1e-09
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 57 1e-08
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 55 5e-08
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 53 3e-07
SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) 51 8e-07
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 44 2e-04
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 41 0.001
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 39 0.005
SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 38 0.008
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 36 0.033
SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 35 0.058
SB_54894| Best HMM Match : RuvB_C (HMM E-Value=2.3) 34 0.13
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 31 0.72
SB_55473| Best HMM Match : SCP (HMM E-Value=1.6e-22) 31 1.3
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09) 29 2.9
SB_693| Best HMM Match : efhand (HMM E-Value=2e-09) 29 2.9
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_36258| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 28 6.7
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 28 8.9
SB_35399| Best HMM Match : BCL_N (HMM E-Value=7) 28 8.9
SB_32035| Best HMM Match : LRR_1 (HMM E-Value=0.57) 28 8.9
SB_30314| Best HMM Match : CBS (HMM E-Value=2.1) 28 8.9
>SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038)
Length = 92
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 528 KLSTIYLERNPIASDPAYRRKLKILLPTLHQIDATLC 638
KL T+YLERNP++ D AYRRK+K+ LP L QIDATLC
Sbjct: 55 KLHTVYLERNPLSRDTAYRRKVKLALPALKQIDATLC 91
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +1
Query: 280 ANRLTKIENLQQLNKLDQLYISENGITVIENLEN 381
+NR+ +++ L+ L+ L++LYIS NGI I+ LE+
Sbjct: 1 SNRIVELKGLEHLDSLEELYISHNGIEEIKGLES 34
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 164 EIKNLEGLRTLKQLYLGKNKISKIQNLEDL 253
E+K LE L +L++LY+ N I +I+ LE L
Sbjct: 6 ELKGLEHLDSLEELYISHNGIEEIKGLESL 35
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 415 NRITVIENVRHMSDLEELWLNDNQITEWSSID 510
NRI ++ + H+ LEEL+++ N I E ++
Sbjct: 2 NRIVELKGLEHLDSLEELYISHNGIEEIKGLE 33
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 528 KLSTIYLERNPIASDPAYRRKLKILLPTLHQIDATLC 638
KL T+YLERNP++ D AYRRK+K+ LP L QIDATLC
Sbjct: 443 KLHTVYLERNPLSRDTAYRRKVKLALPALKQIDATLC 479
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = +1
Query: 265 ILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAV-----NRITV 429
IL L N + IENL L KL++LY+ +N I IE LE+ +L ++L NRI
Sbjct: 335 ILDLSFNVIKVIENLNSLTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKIRSNRIVE 394
Query: 430 IENVRHMSDLEELWLNDNQITEWSSID 510
++ + H+ LEEL+++ N I E ++
Sbjct: 395 LKGLEHLESLEELYISHNGIEEIKGLE 421
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 274 LQANRLTKIENLQQLNKLDQLYISENGITVIENLEN 381
+++NR+ +++ L+ L L++LYIS NGI I+ LE+
Sbjct: 387 IRSNRIVELKGLEHLESLEELYISHNGIEEIKGLES 422
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +1
Query: 274 LQANRLTKIENLQQLNKLDQLYISEN-GITVIENL-ENQIKLQTLDLAVNRITVIENVRH 447
L R+ KI+N ++L + + + +N + I L I + LDL+ N I VIEN+
Sbjct: 292 LTHGRIDKIQNFERLRCVKKKALEKNQSVDAIPMLCPLLIMTRILDLSFNVIKVIENLNS 351
Query: 448 MSDLEELWLNDNQI 489
++ LE+L+L N+I
Sbjct: 352 LTKLEKLYLVQNKI 365
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 167 IKNLEGLRTLKQLYLGKNKISKIQNLEDLT 256
I+NL L L++LYL +NKI +I+ LE LT
Sbjct: 346 IENLNSLTKLEKLYLVQNKIGRIEGLEHLT 375
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 164 EIKNLEGLRTLKQLYLGKNKISKIQNLEDL 253
E+K LE L +L++LY+ N I +I+ LE L
Sbjct: 394 ELKGLEHLESLEELYISHNGIEEIKGLESL 423
>SB_11899| Best HMM Match : LRR_1 (HMM E-Value=1.2e-20)
Length = 681
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
+L +L+L NR+ KI NL+ L KLD L + N I+ IENL + +L+ L+LA N I +
Sbjct: 208 SLRVLMLGKNRIRKINNLEALTKLDVLDLHGNRISKIENLSHLTELRVLNLAGNEILKVC 267
Query: 436 NVRHMSDLEELWLNDNQI 489
N+ M L EL L N+I
Sbjct: 268 NISGMRSLAELNLRRNKI 285
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/83 (38%), Positives = 46/83 (55%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIEN 438
L L + N++ +I L L L L + +N I I NLE KL LDL NRI+ IEN
Sbjct: 187 LIFLDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKINNLEALTKLDVLDLHGNRISKIEN 246
Query: 439 VRHMSDLEELWLNDNQITEWSSI 507
+ H+++L L L N+I + +I
Sbjct: 247 LSHLTELRVLNLAGNEILKVCNI 269
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVI 432
L++L L NR++KIENL L +L L ++ N I + N+ L L+L N+I +
Sbjct: 231 LDVLDLHGNRISKIENLSHLTELRVLNLAGNEILKVCNISGMRSLAELNLRRNKICTV 288
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +2
Query: 161 QEIKNLEGLRTLKQLYLGKNKISKIQNLEDLT 256
+EI L L++L+ L LGKN+I KI NLE LT
Sbjct: 198 EEISGLSSLKSLRVLMLGKNRIRKINNLEALT 229
Score = 34.7 bits (76), Expect = 0.077
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
N + L L RLT L+ + L L N I I++L N +L LD+ N+I I
Sbjct: 142 NPDRLNLDRRRLTVCPILEGEDNLRLLNFQHNLIRNIQHLANLRRLIFLDIYDNQIEEIS 201
Query: 436 NVRHMSDLEELWLNDNQITEWSSIDICNK 522
+ + L L L N+I + ++++ K
Sbjct: 202 GLSSLKSLRVLMLGKNRIRKINNLEALTK 230
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 161 QEIKNLEGLRTLKQLYLGKNKISKIQNLEDLT 256
++I NLE L L L L N+ISKI+NL LT
Sbjct: 220 RKINNLEALTKLDVLDLHGNRISKIENLSHLT 251
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
F+N+ L L + KI+NL L L + N I IE L+ + LQ LDL+ N I V
Sbjct: 42 FENVLALRLDFKNILKIDNLWSFVNLTTLQLDNNIIEKIEGLDMLVNLQWLDLSFNNIEV 101
Query: 430 IENVRHMSDLEELWLNDNQITEWSSID 510
IE + ++ L++L L +N+IT+ ++D
Sbjct: 102 IEGLDKLTKLKDLTLYNNRITKIENMD 128
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/86 (38%), Positives = 47/86 (54%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
F NL L L N + KIE L L L L +S N I VIE L+ KL+ L L NRIT
Sbjct: 64 FVNLTTLQLDNNIIEKIEGLDMLVNLQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITK 123
Query: 430 IENVRHMSDLEELWLNDNQITEWSSI 507
IEN+ +++L + +N + + ++
Sbjct: 124 IENMDSLTNLHVFSIGNNSLKQLDNV 149
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
NL+ L L N + IE L +L KL L + N IT IEN+++ L + N + ++
Sbjct: 88 NLQWLDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKIENMDSLTNLHVFSIGNNSLKQLD 147
Query: 436 NV---RHMSDLEELWLNDNQITE 495
NV R +L L L+ N E
Sbjct: 148 NVIYLRRFKNLRTLNLSFNPFCE 170
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 167 IKNLEGLRTLKQLYLGKNKISKIQNLEDLT 256
I+ L+ L LK L L N+I+KI+N++ LT
Sbjct: 102 IEGLDKLTKLKDLTLYNNRITKIENMDSLT 131
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIEN 438
L+ L LQ N L K+ENL++L+ LD L +S N I IEN+ L TL +A NR+ +
Sbjct: 36 LKCLYLQQNMLKKVENLEELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGD 95
Query: 439 VRHMSDLEELWLND---NQITEWSSIDICNKTTN 531
++ ++ ++L + D N+I + + +D+ + N
Sbjct: 96 IKELASCQKLSIVDLSYNKIDDPNIVDVLAEMPN 129
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
+ ++ L L+ N + KIENL + +L LY+ +N + +ENLE L TL+++ N I
Sbjct: 11 YTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKVENLEELDGLDTLNVSNNIIRS 70
Query: 430 IENVRHMSDLEELWLNDNQITEWSSI 507
IEN+ + L L + N++ I
Sbjct: 71 IENIACLPVLNTLQIAHNRLASAGDI 96
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +1
Query: 295 KIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWL 474
KIENL++ + L++ NGI IENL +L+ L L N + +EN+ + L+ L +
Sbjct: 4 KIENLEEYTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKVENLEELDGLDTLNV 63
Query: 475 NDNQITEWSSI 507
++N I +I
Sbjct: 64 SNNIIRSIENI 74
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 161 QEIKNLEGLRTLKQLYLGKNKISKIQNLEDL 253
++I+NL ++ LK LYL +N + K++NLE+L
Sbjct: 25 EKIENLGFMKELKCLYLQQNMLKKVENLEEL 55
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 364 IENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWLNDNQITEWSSID 510
IENLE ++ L L N I IEN+ M +L+ L+L N + + +++
Sbjct: 5 IENLEEYTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKVENLE 53
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
NL +L L N ++KI+NL L LY+ N I+ IE L++ +L L L N ITVIE
Sbjct: 52 NLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISRIEGLDHCRRLSKLYLGGNSITVIE 111
Query: 436 NVRHMSDLEELWLNDNQI 489
+ + +L EL + +
Sbjct: 112 GLDKLENLRELHMEKQHL 129
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +1
Query: 304 NLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWLNDN 483
N L +L LY++E GI I+NL L L L N I+ I+N+ +L L+L +N
Sbjct: 24 NQHYLKRLTHLYLAEKGIDEIDNLSMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYLQNN 83
Query: 484 QITEWSSIDICNK 522
+I+ +D C +
Sbjct: 84 KISRIEGLDHCRR 96
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +1
Query: 268 LVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRH 447
L L + +I+NL L LY+ +N I+ I+NL L L L N+I+ IE + H
Sbjct: 34 LYLAEKGIDEIDNLSMCKNLSVLYLYDNNISKIKNLGFAGNLTHLYLQNNKISRIEGLDH 93
Query: 448 MSDLEELWLNDNQITEWSSID 510
L +L+L N IT +D
Sbjct: 94 CRRLSKLYLGGNSITVIEGLD 114
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 164 EIKNLEGLRTLKQLYLGKNKISKIQNL 244
EI NL + L LYL N ISKI+NL
Sbjct: 43 EIDNLSMCKNLSVLYLYDNNISKIKNL 69
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 164 EIKNLEGLRTLKQLYLGKNKISKIQNLE 247
+IKNL L LYL NKIS+I+ L+
Sbjct: 65 KIKNLGFAGNLTHLYLQNNKISRIEGLD 92
>SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021)
Length = 198
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIEN 438
L+ L LQ N L K+ENL++L+ LD L +S N I IEN+ L TL +A NR+ +
Sbjct: 128 LKCLYLQQNMLKKMENLEELDGLDTLNVSNNIIRSIENIACLPVLNTLQIAHNRLASAGD 187
Query: 439 VRHMSDLEEL 468
++ ++ ++L
Sbjct: 188 IKELASCQKL 197
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
+ ++ L L+ N + KIENL + +L LY+ +N + +ENLE L TL+++ N I
Sbjct: 103 YTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKMENLEELDGLDTLNVSNNIIRS 162
Query: 430 IENVRHMSDLEELWLNDNQITEWSSI 507
IEN+ + L L + N++ I
Sbjct: 163 IENIACLPVLNTLQIAHNRLASAGDI 188
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +1
Query: 262 EILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENV 441
+IL L KIENL++ + L++ NGI IENL +L+ L L N + +EN+
Sbjct: 85 DILYLHFRGFGKIENLEEYTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKMENL 144
Query: 442 RHMSDLEELWLNDNQITEWSSI 507
+ L+ L +++N I +I
Sbjct: 145 EELDGLDTLNVSNNIIRSIENI 166
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 328 DQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWLNDNQITEWSSI 507
D LY+ G IENLE ++ L L N I IEN+ M +L+ L+L N + + ++
Sbjct: 85 DILYLHFRGFGKIENLEEYTGVKCLWLECNGIEKIENLGFMKELKCLYLQQNMLKKMENL 144
Query: 508 D 510
+
Sbjct: 145 E 145
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 161 QEIKNLEGLRTLKQLYLGKNKISKIQNLEDL 253
++I+NL ++ LK LYL +N + K++NLE+L
Sbjct: 117 EKIENLGFMKELKCLYLQQNMLKKMENLEEL 147
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 48.0 bits (109), Expect = 8e-06
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITV 429
F L++L L + ++NL L L +L +SE+ + + ++ L+ + N I+
Sbjct: 15 FPGLQVLTLIGQEIEVLQNLDCLPHLTELCVSESSLKELSGIDKCTNLKKVYFYDNHISK 74
Query: 430 IENVRHMSDLEELWLNDNQI 489
IEN+ ++ L LWLN+N I
Sbjct: 75 IENLSSLTRLTVLWLNNNNI 94
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/79 (27%), Positives = 44/79 (55%)
Frame = +1
Query: 286 RLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLEE 465
R ++E LQQ+ L+ + NG+ ++ + + L+ L ++ N +T +E+V HM LE
Sbjct: 862 RHCRVEALQQITVLN---LHGNGLNRLKFINSMTALKRLIVSFNELTRLEDVNHMLFLEH 918
Query: 466 LWLNDNQITEWSSIDICNK 522
L + N++T + C++
Sbjct: 919 LDASFNKLTTLEGVKGCSR 937
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 161 QEIKNLEGLRTLKQLYLGKNKISKIQNLEDLT 256
+E+ ++ LK++Y N ISKI+NL LT
Sbjct: 51 KELSGIDKCTNLKKVYFYDNHISKIENLSSLT 82
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
NL L L +N+++ IE L L L L +S N I ++E LEN KL LDL+ N IE
Sbjct: 57 NLRHLDLSSNQISHIEGLTSLGYLRVLNLSCNRIYLVEGLENLRKLTKLDLSYN---FIE 113
Query: 436 NVRHMSDL 459
NV + DL
Sbjct: 114 NVSGLKDL 121
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +1
Query: 283 NRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLE 462
N + KIENL+ L L +L ++ N I ++ L+ LQ +DL N+I I VR++ +L+
Sbjct: 179 NNIKKIENLETLKTLQKLNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEVRYIRELK 238
Query: 463 EL 468
L
Sbjct: 239 LL 240
Score = 39.5 bits (88), Expect = 0.003
Identities = 37/117 (31%), Positives = 54/117 (46%)
Frame = +1
Query: 157 LTGNKKLGRFEDPQTIILG*K*NKQNTKP*GFDNLEILVLQANRLTKIENLQQLNKLDQL 336
LT LG + QT+IL T NL L + N+LT + + L
Sbjct: 119 LTDITPLGDYVHLQTVILSHNSLTDLTALGNMPNLITLDVSHNKLTTVLDFTPPLALR-- 176
Query: 337 YISENGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWLNDNQITEWSSI 507
S N I IENLE LQ L+LA N I ++ ++ L+E+ L +NQI + + +
Sbjct: 177 --SHNNIKKIENLETLKTLQKLNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEV 231
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 507 RYLQQNNKLSTIYLERNPIASDPAYRRKLKILLPTLHQID 626
RY+++ L + L+ NPI S P YR L + TL ++D
Sbjct: 232 RYIRELKLLRNLNLQSNPIQSLPDYRLSLLFRIQTLLELD 271
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 292 TKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIENV--RHMSDLEE 465
T + ++ K+ +Y+ N I IEN + L+ +DL+ N+I I+ + + + +L
Sbjct: 342 TAVTTKSRIPKVQVMYLKNNKIVAIENGAFPLNLRVMDLSNNKIGRIDKIVLKDLVNLNS 401
Query: 466 LWLNDNQIT 492
L LN+NQ+T
Sbjct: 402 LLLNNNQLT 410
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 247 GFDNLEILVLQANRLTKIEN--LQQLNKLDQLYISENGITVIEN--LENQIKLQTLDLAV 414
G +L+ L L NRL I L L +L + N + L+ + L++L L
Sbjct: 138 GLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQGTLSLKSLQLNN 197
Query: 415 NRITVIE--NVRHMSDLEELWLNDNQITE 495
N +T IE R++ LE L+LN+N ITE
Sbjct: 198 NLLTRIEPGTFRNLRGLEILYLNNNNITE 226
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +1
Query: 256 NLEILVLQANRLTKIE----NLQQLNKLDQLYISENGITVIEN--LENQIKLQTLDLAVN 417
+L L+L +N LT+I NL L LD+LY++ N I +++ L LDL N
Sbjct: 78 DLTKLILASNSLTEISGDVFNLPALVLLDELYLAYNKIAELDSKVFAGYSGLTVLDLHDN 137
Query: 418 RITVI-ENVRHMSDLEELWLNDNQIT 492
+T I E++ + DLE L L +N I+
Sbjct: 138 LLTSIPEDIIILRDLERLDLTNNDIS 163
>SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 253 DNLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENL-ENQIKLQTLDL 408
+NL L L AN + K+E L +L L +L++ +N I +E EN LQ L+L
Sbjct: 477 ENLRELYLAANTIRKVEGLDRLEHLTKLHLRDNQIDSLEGFSENMKNLQYLNL 529
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 FDNLEILVLQANRLTKIENLQQLNKLDQLYISENGITV-IENLENQIKLQTLDLAVNRIT 426
F LEIL + LT ++N +L L +L +S+N I+ ++NL KL L L+ N+I
Sbjct: 37 FVKLEILSMINVGLTTLKNFPKLPNLRKLELSDNRISSGLQNLTGSPKLTHLSLSGNKIK 96
Query: 427 VIENVRHMSDLEELWLNDNQITEWSSID 510
+E + + L L D E +++D
Sbjct: 97 DLETLEPLEKLSNLKSLDLFNCEVTNVD 124
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 35.9 bits (79), Expect = 0.033
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +1
Query: 256 NLEILVLQANRLTKIE-NLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRIT-- 426
NL L L N + ++ + L L L+ S N + ++ ++ L+ LDL++N+I+
Sbjct: 266 NLVELNLNKNNIQELPYDFHLLKNLKTLFFSANNLEIVPESICKLPLRELDLSINKISSL 325
Query: 427 ---VIENVRHMSDLEELWLNDNQIT 492
V ++ MS L EL ++ N+IT
Sbjct: 326 PDFVRASIGDMSTLVELDISSNKIT 350
>SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 35.5 bits (78), Expect = 0.044
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 286 RLTKIENLQQLNKLDQLYISE--NGITVIENLENQIKLQTLDLAVNRITVIENVRHMSDL 459
RL+K ENL + L+ + +ENL+N L L ++ + I IE + ++ L
Sbjct: 93 RLSKEENLANIKSLNLALGKDLNKKFRYLENLDNLKNLSALHISNHMIEKIEKLDKLTQL 152
Query: 460 EELWLNDNQITEWSSID 510
EL L+ N IT+ ++
Sbjct: 153 RELNLSRNSITKLEGLE 169
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 35.1 bits (77), Expect = 0.058
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIEN 438
L+ L L N+L + L L L L + N + ++ +E L+ LDL N + +
Sbjct: 187 LQKLSLDHNQLIATKGLSSLRVLQTLSCAHNHLPNVKEIEGCQLLENLDLRANNLLQPPS 246
Query: 439 VRHMSDLEELWLNDNQI 489
+ + L EL L+DN I
Sbjct: 247 LTNHVLLRELRLDDNSI 263
>SB_54894| Best HMM Match : RuvB_C (HMM E-Value=2.3)
Length = 148
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 280 ANRLTKIENLQQLNKLDQLYISENGITVIE 369
+NR+ +++ L+ L+ L++LYIS NGI I+
Sbjct: 1 SNRIVELKGLEHLDSLEELYISHNGIEEIK 30
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 415 NRITVIENVRHMSDLEELWLNDNQITE 495
NRI ++ + H+ LEEL+++ N I E
Sbjct: 2 NRIVELKGLEHLDSLEELYISHNGIEE 28
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 256 NLEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRITVIE 435
NL +L + L+ ++ + L+ L +LY++ N I+ + + LQ LDL N + I
Sbjct: 757 NLRMLWMCRCSLSDLDGISSLSSLAELYLAFNDISDVSPVSMLDNLQVLDLEGNLVDEIA 816
Query: 436 NVRHMS 453
V ++
Sbjct: 817 QVEFLT 822
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 346 ENGITVIE-NLENQIKLQTLDLAVNRITVIEN--VRHMSDLEELWLNDNQITEWSSIDIC 516
E+ +TV+ LEN L L L+ N+I+VI N ++ DL L L+DN + + + +IC
Sbjct: 46 EDLLTVVPPELENAKALIVLSLSNNKISVIPNQLFINLIDLIYLDLSDNCLGNYMA-NIC 104
Query: 517 NKTTNYPQYIW 549
NK +W
Sbjct: 105 NKVIYSNVELW 115
>SB_55473| Best HMM Match : SCP (HMM E-Value=1.6e-22)
Length = 141
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +1
Query: 448 MSDLEELWLNDNQITEWSSIDICNKTTNYPQYIWRGTR 561
+ D ++W N+++ ++ + T ++ Q +WRGTR
Sbjct: 87 IGDALQIWYNESESYQYDNPGFALTTGHFTQIVWRGTR 124
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 361 VIENLENQIKLQTLDLAVNRITVIENVRHMSDLEELWLNDNQITEWSSIDICNKTTNY-- 534
+IENL+ K Q + L+V I + +VR S L++ LNDN+ ++ NY
Sbjct: 371 LIENLQYSRKHQFVILSV--ILIARHVRIQSLLKKQGLNDNESSDEEEFSDMEFDNNYKV 428
Query: 535 PQYIW 549
P IW
Sbjct: 429 PGQIW 433
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 286 RLTKIENL-QQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRI-TVIENVRH-MSD 456
+++ IEN+ L++ D + S+N I IE +L+T+ L NR+ V E + + +
Sbjct: 520 KISVIENMGATLDQFDTIDFSDNDIRKIEGFPLLKRLKTILLNNNRVCRVAEGLGECLPN 579
Query: 457 LEELWLNDNQITEWSSID 510
LE + L +N + E ++
Sbjct: 580 LESIILTNNAMQELKDLE 597
>SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 508
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Frame = +1
Query: 265 ILVLQANRLTKIENLQQLNKLDQLYISENG------ITVIENLENQIKLQTLDLAVNR-- 420
I V A R+ K L+ KL L ++ NG I + ++LE L LDL+ NR
Sbjct: 262 IQVKGAQRIAK--GLEGNMKLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVG 319
Query: 421 ----ITVIENVRHMSDLEELWLNDNQITEWSSIDICN 519
I +++ S LE L+ N ITE + + N
Sbjct: 320 DEGAIAFARTLKNNSSLESLYAAKNNITENGACSLLN 356
>SB_693| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 500
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Frame = +1
Query: 265 ILVLQANRLTKIENLQQLNKLDQLYISENG------ITVIENLENQIKLQTLDLAVNR-- 420
I V A R+ K L+ KL L ++ NG I + ++LE L LDL+ NR
Sbjct: 254 IQVKGAQRIAK--GLEGNMKLKTLKLAWNGVATDGAIALAKSLEGNTTLVELDLSSNRVG 311
Query: 421 ----ITVIENVRHMSDLEELWLNDNQITEWSSIDICN 519
I +++ S LE L+ N ITE + + N
Sbjct: 312 DEGAIAFARTLKNNSSLESLYAAKNNITENGACSLLN 348
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 LEILVLQANRLTKIENLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRI-TVIE 435
L+ L L N LT + + L LY+S N + + + KL L LA NR+ V
Sbjct: 419 LKYLDLSDNELTDLPRKEWSPVLKTLYLSGNLLETLPDSMASAKLVNLYLARNRLYEVPA 478
Query: 436 NVRHMSDLEELWLNDN 483
V + LE L L+DN
Sbjct: 479 CVCELLTLEILDLSDN 494
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 259 LEILVLQANRLTKIE-NLQQLNKLDQLYISENGITVIEN-LENQIKLQTLDLAVNRITVI 432
L +L + NRL + L KL L + +N + + + N L LD++ NR+ +
Sbjct: 7 LSLLNVDRNRLEVLPVELGSCTKLSVLSLRDNLLQRLPTEIGNCRNLHVLDVSGNRLECL 66
Query: 433 ENVRHMSDLEELWLNDNQ 486
L+ LWL++NQ
Sbjct: 67 PLTIGTLPLKALWLSENQ 84
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 256 NLEILVLQANRLTKIE-NLQQLNKLDQLYISENGITVIENLENQIKLQTLDLAVNRI-TV 429
+++ + N L K+ + + L L ++ N +T + L N L LD++ NR+ ++
Sbjct: 88 DVKAIDFSGNSLEKLPAEIGHMEHLQTLNLNCNALTTVPPLRNAKNLARLDISHNRLESL 147
Query: 430 IENVRHMSDLEELWLNDNQI 489
E + ++ + E++ +N I
Sbjct: 148 PEGIFNLELIAEIYAANNLI 167
>SB_36258| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 522
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -1
Query: 628 ASIWCSVGSNIFNFL-L*AGSEAIGFLSKYIVDNL---LFCCKYLSMTIL 491
ASIWC V N+ N L G AIG KY + L L CC L ++
Sbjct: 265 ASIWCLVLQNLVNLEDLTIGPLAIGRGEKYFSEELKAALCCCGNLRRLVI 314
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +1
Query: 268 LVLQANRLTKIENLQQLNKLDQLYISENGITVIEN--LENQIKLQTLDLAVNRI----TV 429
LVL N++ + L +L I NG+ VI N + +DL+ N I
Sbjct: 266 LVLDYNQIRNLSQYPFTGHLQKLSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEIRDFPEQ 325
Query: 430 IENVRHMSDLEELWLNDNQITEWSSIDICNKTT 528
+ V + +LE L+ N IT +D+ + T
Sbjct: 326 LFRVFLLRNLESADLSSNAITFGGILDVLDSVT 358
>SB_35399| Best HMM Match : BCL_N (HMM E-Value=7)
Length = 182
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 188 SNLPSFLFPVKIQNTYSQYILYK 120
S LP F+ P KI++T+SQ+ K
Sbjct: 22 SRLPPFMKPAKIRHTFSQFAFEK 44
>SB_32035| Best HMM Match : LRR_1 (HMM E-Value=0.57)
Length = 168
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 310 QQLNKLDQLYISENGITVIENLENQIK----LQTLDLAVNRITVIENVRHMSDLEELWLN 477
+ +N++ ++ + +T + ++ + L+ LDL+ NRI+ + ++ + L L
Sbjct: 97 EDVNRVFEINLHAQKLTRVPDIHKAVNSLSALEELDLSTNRISKVPDISRCKHI--LRLE 154
Query: 478 DNQITEWSSI 507
NQ+T SS+
Sbjct: 155 SNQLTTLSSL 164
>SB_30314| Best HMM Match : CBS (HMM E-Value=2.1)
Length = 869
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +1
Query: 268 LVLQANRLTKIENLQQLNKLDQL--YISENGITVIENLENQIKLQTLD--LAVNRITVIE 435
L+L NRL I L +N+L + +S NG+ I L + +L +++ L++NR+ I
Sbjct: 538 LLLSINRLLSINRLLSINRLLSINGLLSINGLLSINRLLSINRLLSINRLLSINRLLSIN 597
Query: 436 NVRHMSDL 459
+ ++ L
Sbjct: 598 RLLSINRL 605
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,988,180
Number of Sequences: 59808
Number of extensions: 456045
Number of successful extensions: 1119
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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