SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0157.Seq
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    34   0.002
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.8  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   9.0  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   9.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
 Frame = +1

Query: 229  QNTKP*GFDNLEILVLQANRLTKIE--NLQQLNKLDQLYISENGITVIENLE--NQIKLQ 396
            QN    G +NL+IL L+ NR+ +++    ++L+ L +LY+  N I  I NL       L+
Sbjct: 834  QNRTFNGLNNLQILHLEDNRIRELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLE 893

Query: 397  TLDLAVNRITV--IENVRHMSDLEELWLNDN 483
             L L+ NR+    +  V   + L EL L  N
Sbjct: 894  ILRLSGNRLVTFPVWQVTLNARLVELSLGSN 924



 Score = 31.1 bits (67), Expect = 0.011
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +1

Query: 259 LEILVLQANRLTKIENL--QQLNKLDQLYISENGITVIEN-LENQIKLQTLDLAVNRITV 429
           L  L L  N +  I+ L  +  + L +L +S N +T + + L +   L+TLDL  NRI+ 
Sbjct: 409 LNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISN 468

Query: 430 IEN--VRHMSDLEELWLNDNQI 489
             N   R++  L  L L  N I
Sbjct: 469 FYNGSFRNLDQLTGLRLIGNDI 490



 Score = 27.5 bits (58), Expect = 0.14
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 388 KLQTLDLAVNRITVIENVRHMSDLEELWLNDNQI 489
           K++TLD + NRIT +  +     +E L++N+N I
Sbjct: 596 KVKTLDASHNRITELSPLSVPDSVELLFINNNYI 629


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 631 HCVDKKFISWDWDERRCGKRNII 699
           H + KK I    +E + GKRNII
Sbjct: 252 HGLTKKVIQLKKEEYKSGKRNII 274


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = +1

Query: 250 FDNLEILVLQANRLTKI---ENLQQLNKLDQLYISENGIT-VIENLENQIKLQTLDLAVN 417
           FD   I+ +   R+      EN    N +  ++  +  IT +I+N+  ++K   L L+ N
Sbjct: 317 FDMARIIQITPKRIQYAQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVL-LSNN 375

Query: 418 RITVIENVRHMSDLEELWLNDNQITEWSS 504
            + + +N   MS       N+NQ TEWS+
Sbjct: 376 DVYLYQNT--MS-------NNNQRTEWSA 395


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = +1

Query: 250 FDNLEILVLQANRLTKI---ENLQQLNKLDQLYISENGIT-VIENLENQIKLQTLDLAVN 417
           FD   I+ +   R+      EN    N +  ++  +  IT +I+N+  ++K   L L+ N
Sbjct: 355 FDMARIIQITPKRIQYAQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVL-LSNN 413

Query: 418 RITVIENVRHMSDLEELWLNDNQITEWSS 504
            + + +N   MS       N+NQ TEWS+
Sbjct: 414 DVYLYQNT--MS-------NNNQRTEWSA 433


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 112 LQYYNIINIEQIPVPVPIYCGNF 134


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 LQFPSVSWI*SYRVPLQIYCG*F 528
           LQ+ ++  I    VP+ IYCG F
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNF 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,236
Number of Sequences: 438
Number of extensions: 5204
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -