SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0156.Seq
         (534 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    34   1.8  
UniRef50_Q5CMV9 Cluster: Synthetic antigen; n=2; Cryptosporidium...    33   3.1  
UniRef50_P81311 Cluster: Uncharacterized protein MJ0703.1; n=1; ...    33   3.1  
UniRef50_A1D1N2 Cluster: C6 transcription factor, putative; n=5;...    33   4.1  
UniRef50_P43694 Cluster: Transcription factor GATA-4; n=34; Mamm...    33   5.4  
UniRef50_Q22SE9 Cluster: Putative uncharacterized protein; n=6; ...    32   7.2  
UniRef50_A0NFU5 Cluster: ENSANGP00000030061; n=1; Anopheles gamb...    32   7.2  
UniRef50_UPI00006CF2EF Cluster: hypothetical protein TTHERM_0006...    32   9.5  
UniRef50_A4SRQ2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q9G8N9 Cluster: Orf504; n=1; Naegleria gruberi|Rep: Orf...    32   9.5  
UniRef50_Q4XQF4 Cluster: Pc-fam-2 protein, putative; n=1; Plasmo...    32   9.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 436 FKFLKWVDELIVHLV*SGY*SP 501
           F  L+WVDEL  HLV SGY SP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q5CMV9 Cluster: Synthetic antigen; n=2; Cryptosporidium|Rep:
            Synthetic antigen - Cryptosporidium hominis
          Length = 1238

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = +3

Query: 3    FFYLFITFNFMCIFFT-FSLKVNNIIKSNKYVTFHNTFTLNRFIFYNF 143
            F+++FI F F  I  T F LK+ + IK  K++ +HN   ++ +IF+ F
Sbjct: 1113 FYFIFIVFIFETISDTGFILKILSNIKIMKFLLYHNKTDIS-YIFWQF 1159


>UniRef50_P81311 Cluster: Uncharacterized protein MJ0703.1; n=1;
           Methanocaldococcus jannaschii|Rep: Uncharacterized
           protein MJ0703.1 - Methanococcus jannaschii
          Length = 102

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -3

Query: 121 FKVNVLWNVTYLFDFIILLTFRENVKKI 38
           F +++LW + +L  F+IL+TF + ++KI
Sbjct: 37  FTISILWGMLFLILFLILITFSKTIRKI 64


>UniRef50_A1D1N2 Cluster: C6 transcription factor, putative; n=5;
           Trichocomaceae|Rep: C6 transcription factor, putative -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 1061

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
 Frame = +2

Query: 140 FYTIKTKRKRKM----QDKCLWTCPDYRHLCRPWT--STKCKVHGETLRQ 271
           FY  +T RKRK+    +     TC DY+H+C  ++  ST  + H E   Q
Sbjct: 47  FYRCRTCRKRKIRCSGEQPVCQTCVDYKHVCLGYSEPSTHVRTHSENASQ 96


>UniRef50_P43694 Cluster: Transcription factor GATA-4; n=34;
           Mammalia|Rep: Transcription factor GATA-4 - Homo sapiens
           (Human)
          Length = 442

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = -2

Query: 380 PSGGNSQPV*RLMEANSRKLEATTASVEYMERRKHQPVAMSHHALCTLLMSTGDINAYNQ 201
           PSG  S P      A+S    ATT+S E M   K +P   SH+   + +  T  ++A + 
Sbjct: 334 PSGSESLPP--ASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMS- 390

Query: 200 GMSKDIYPAFSSFFL 156
           G    I+P  S+  L
Sbjct: 391 GHGPSIHPVLSALKL 405


>UniRef50_Q22SE9 Cluster: Putative uncharacterized protein; n=6;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1122

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 11/23 (47%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = +2

Query: 161 RKRKMQDKCLWT-CPDYRHLCRP 226
           +KR++Q++C  T CP+Y++LC P
Sbjct: 435 KKRRLQEQCAHTYCPNYKYLCDP 457


>UniRef50_A0NFU5 Cluster: ENSANGP00000030061; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030061 - Anopheles gambiae
           str. PEST
          Length = 126

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = +3

Query: 3   FFYLFITFNFMCIFFTFSLKVNNIIKSNKYVTFHNTFTLNRFIFYNFIQLKQKERGKCRI 182
           FF++FI FN  C+   +SL + N  +S  YV+     T+N     N+  ++        I
Sbjct: 33  FFFIFIIFNLFCL---YSLFIFNYFQS--YVSI--LITINYLFVINYTTIR-------FI 78

Query: 183 NVFGHALIIGIYVARGHQQSAKCMV 257
            VF + + +  +VA  H  S K ++
Sbjct: 79  FVFSNFIFVSFFVAIRHVSSVKFLI 103


>UniRef50_UPI00006CF2EF Cluster: hypothetical protein
           TTHERM_00061580; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00061580 - Tetrahymena
           thermophila SB210
          Length = 173

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 18  ITFNFMCIFFTFSLKVNNIIKSNKYVTFHNTFTLNRFIFYNFIQ 149
           +  N   +FF  SLK+N II  N  +   +++ L ++I Y  IQ
Sbjct: 65  VRVNLNSVFFFISLKMNRIITENIQILLCSSYRLLKYINYQRIQ 108


>UniRef50_A4SRQ2 Cluster: Putative uncharacterized protein; n=1;
           Aeromonas salmonicida subsp. salmonicida A449|Rep:
           Putative uncharacterized protein - Aeromonas salmonicida
           (strain A449)
          Length = 194

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
 Frame = +3

Query: 6   FYLFITFNFMCIFFTFSLKVNNIIKSNKYVTFHN-TFTLNRFIFYNFIQL------KQKE 164
           FYLFI +     FF++   V+ +   N +V      F      FY FI L      +QKE
Sbjct: 50  FYLFIIYMHENKFFSYDFFVDGVFGLNTFVVVTAILFAFMSLYFYGFILLFKLGIKEQKE 109

Query: 165 RGKCRINVFGH-ALIIGI---YVARGHQQSA 245
           +GK  +      A+II I   YV   H  SA
Sbjct: 110 KGKNSLRFLTWLAIIISIMTHYVFFEHAMSA 140


>UniRef50_Q9G8N9 Cluster: Orf504; n=1; Naegleria gruberi|Rep: Orf504
           - Naegleria gruberi
          Length = 504

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 18  ITFNFMCIFFTFSLKVNNIIKSNKYVTFHNTFTLNRFIFYNFIQLKQK-ERGKCRIN 185
           +T+N    F  F+L   NII+    V F   F L  FIFY+  ++  K ER +  +N
Sbjct: 157 LTYNIQAYFKLFNLYTINIIEVLLSVIFFLVFFLCYFIFYHLYKINLKLERAEYILN 213


>UniRef50_Q4XQF4 Cluster: Pc-fam-2 protein, putative; n=1;
           Plasmodium chabaudi|Rep: Pc-fam-2 protein, putative -
           Plasmodium chabaudi
          Length = 80

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 15  FITFNFMCIFFTFSLKVNNIIKSNKYVTFHNTFTLNRFI--FYNFI 146
           FI   F+ IFF +  K+   I  N+ +  ++ F  ++FI  FY+FI
Sbjct: 28  FINLFFLLIFFVYKGKIYFFIVINRIININSYFIKSKFILNFYSFI 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,939,553
Number of Sequences: 1657284
Number of extensions: 11730374
Number of successful extensions: 31802
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31749
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -